RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SLC13A1Q9BZW2 595 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 HACL1Q9UJ83 578 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 ZBTB42B2RXF5 422 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 CYB561D2O14569 222 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 CIB2O75838 187 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 APRTP07741 180 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 CSH1P0DML2 217 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 CSH2P0DML3 217 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 CXCL8P10145 99 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 TGFB3P10600 412 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 ATICP31939 592 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 GCLCP48506 637 aaPredicted RBP19.78■□□□□ 0.76
SDCBP-204ENST00000447182 BCAR1P56945 870 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 C15orf59Q2T9L4 293 aaPredicted RBP19.78■□□□□ 0.76
SDCBP-204ENST00000447182 RAB6CQ53S08 254 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 SLC30A9Q6PML9 568 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 KYAT3Q6YP21 454 aaKnown RBP19.78■□□□□ 0.76
SDCBP-204ENST00000447182 ULK2Q8IYT8 1036 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 GSDMBQ8TAX9 411 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 CXorf38Q8TB03 319 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 PANX3Q96QZ0 392 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 NR1H4Q96RI1 486 aaPredicted RBP19.78■□□□□ 0.76
SDCBP-204ENST00000447182 RAB6CQ9H0N0 254 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 GPAMQ9HCL2 828 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 HMX2A2RU54 273 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 EME2A4GXA9 379 aaPredicted RBP19.78■□□□□ 0.76
SDCBP-204ENST00000447182 UGT1A9O60656 530 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 ANPEPP15144 967 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 RPS12P25398 132 aaKnown RBP19.78■□□□□ 0.76
SDCBP-204ENST00000447182 STXBP5Q5T5C0 1151 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 EEF1DP3Q658K8 133 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 RIPOR1Q6ZS17 1223 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 LRRC71Q8N4P6 559 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 SIGLEC10Q96LC7 697 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 TRAPPC9Q96Q05 1148 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 CDT1Q9H211 546 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 UGT1A7Q9HAW7 530 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 UGT1A10Q9HAW8 530 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 UGT1A8Q9HAW9 530 aa19.78■□□□□ 0.76
SDCBP-204ENST00000447182 ZNF487B1APH4 448 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 DPYSL4O14531 572 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 MAP3K13O43283 966 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 NFICP08651 508 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 DPEP1P16444 411 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 BMPR2Q13873 1038 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 CYS1Q717R9 158 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 NDUFAF2Q8N183 169 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 TBCBQ99426 244 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 EBNA1BP2Q99848 306 aaKnown RBP19.77■□□□□ 0.76
SDCBP-204ENST00000447182 C20orf27Q9GZN8 174 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 ASCC2Q9H1I8 757 aaPredicted RBP19.77■□□□□ 0.76
SDCBP-204ENST00000447182 PCDH18Q9HCL0 1135 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 PAPOLBQ9NRJ5 636 aaKnown RBP19.77■□□□□ 0.76
SDCBP-204ENST00000447182 THAP1Q9NVV9 213 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 SLC7A8Q9UHI5 535 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 TNFSF13BQ9Y275 285 aa19.77■□□□□ 0.76
SDCBP-204ENST00000447182 DCAF8L1A6NGE4 600 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 B4GALT5O43286 388 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 ITGB3P05106 788 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 AOC1P19801 751 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 TPSB2P20231 275 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 CNTFP26441 200 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 PAPOLAP51003 745 aaKnown RBP19.76■□□□□ 0.75
SDCBP-204ENST00000447182 AP2B1P63010 937 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 KDSRQ06136 332 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 TPSAB1Q15661 275 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 THEMIS2Q5TEJ8 643 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 FAXCQ5TGI0 409 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 FAM183BPQ6ZVS7 135 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 ZNF534Q76KX8 674 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 TMEM192Q8IY95 271 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 STKLD1Q8NE28 680 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 PCDH19Q8TAB3 1148 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 HEXIM2Q96MH2 286 aaKnown RBP19.76■□□□□ 0.75
SDCBP-204ENST00000447182 LBHD1Q9BQE6 289 aaPredicted RBP19.76■□□□□ 0.75
SDCBP-204ENST00000447182 ZNF395Q9H8N7 513 aaPredicted RBP19.76■□□□□ 0.75
SDCBP-204ENST00000447182 PCMTD2Q9NV79 361 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 HEY1Q9Y5J3 304 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 CCDC195A0A1B0GUA6 201 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 SDR42E2A6NKP2 422 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 P4HA1P13674 534 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 STX3Q13277 289 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 CCDC14Q49A88 953 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 TMCO4Q5TGY1 634 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 OR6B2Q6IFH4 312 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 UBA3Q8TBC4 463 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 ZNF670Q9BS34 389 aa19.76■□□□□ 0.75
SDCBP-204ENST00000447182 FAM124BQ9H5Z6 455 aaPredicted RBP19.76■□□□□ 0.75
SDCBP-204ENST00000447182 STN1Q9H668 368 aaKnown RBP19.76■□□□□ 0.75
SDCBP-204ENST00000447182 LGR5O75473 907 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 GCATO75600 419 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 CACNA2D1P54289 1103 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 INCA1Q0VD86 236 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 CDO1Q16878 200 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 LCLAT1Q6UWP7 414 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 ZFAND2BQ8WV99 257 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 JDP2Q8WYK2 163 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 PIWIL1Q96J94 861 aaKnown RBP19.75■□□□□ 0.75
SDCBP-204ENST00000447182 THTPAQ9BU02 230 aa19.75■□□□□ 0.75
SDCBP-204ENST00000447182 GBA2Q9HCG7 927 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms