RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 NDE1Q9NXR1 346 aa14.75□□□□□ -0.05
ERCC3-203ENST00000445889 ZBED1O96006 694 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 OSBPP22059 807 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 RXRBP28702 533 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 TAP1Q03518 808 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 LAMTOR4Q0VGL1 99 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 NOMO1Q15155 1222 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 DLK2Q6UY11 383 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 ADGRF2Q8IZF7 708 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 SLC4A11Q8NBS3 891 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 MRPL4Q9BYD3 311 aaKnown RBP14.74□□□□□ -0.05
ERCC3-203ENST00000445889 B3GNT5Q9BYG0 378 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 MMADHCQ9H3L0 296 aaPredicted RBP14.74□□□□□ -0.05
ERCC3-203ENST00000445889 MINDY3Q9H8M7 445 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 MAP3K20Q9NYL2 800 aaKnown RBP14.74□□□□□ -0.05
ERCC3-203ENST00000445889 SIX4Q9UIU6 781 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 ANGPTL2Q9UKU9 493 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 PCDHGC3Q9UN70 934 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 MFHAS1Q9Y4C4 1052 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 LTBP4Q8N2S1 1624 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 OGTO15294 1046 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 PIGRP01833 764 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 IL4RP24394 825 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 TCF7P36402 384 aaPredicted RBP14.74□□□□□ -0.05
ERCC3-203ENST00000445889 BCAR1P56945 870 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 DSG1Q02413 1049 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 ZNF667Q5HYK9 610 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 PPM1JQ5JR12 505 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 C6orf163Q5TEZ5 329 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 RNF111Q6ZNA4 994 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 CYP4V2Q6ZWL3 525 aaPredicted RBP14.74□□□□□ -0.05
ERCC3-203ENST00000445889 SCUBE3Q8IX30 993 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 HACE1Q8IYU2 909 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 WRNIP1Q96S55 665 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 MIS12Q9H081 205 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 MAN1C1Q9NR34 630 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 ZNF358Q9NW07 568 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 CPSF3Q9UKF6 684 aaKnown RBP14.74□□□□□ -0.05
ERCC3-203ENST00000445889 PLA2G4CQ9UP65 541 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 DNAJC16Q9Y2G8 782 aa14.74□□□□□ -0.05
ERCC3-203ENST00000445889 SLC15A5A6NIM6 579 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 A8MXQ7 604 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 PRPSAP2O60256 369 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 RNASEH1O60930 286 aaKnown RBP14.73□□□□□ -0.05
ERCC3-203ENST00000445889 TNNC2P02585 160 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 UBA1P22314 1058 aaKnown RBP14.73□□□□□ -0.05
ERCC3-203ENST00000445889 PHKA2P46019 1235 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 GTF2A2P52657 109 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 IGBP1P78318 339 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 STX3Q13277 289 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 TCHHL1Q5QJ38 904 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-203ENST00000445889 RSAD1Q9HA92 442 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 PNPOQ9NVS9 261 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 KCNK4Q9NYG8 393 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 TAGLN3Q9UI15 199 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 G3BP2Q9UN86 482 aaKnown RBP14.73□□□□□ -0.05
ERCC3-203ENST00000445889 NDC80O14777 642 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 TM7SF2O76062 418 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 IQCF3P0C7M6 154 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 GSTT1P30711 240 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 STIP1P31948 543 aaKnown RBP14.73□□□□□ -0.05
ERCC3-203ENST00000445889 CDH5P33151 784 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-203ENST00000445889 MSX2P35548 267 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-203ENST00000445889 ABCG1P45844 678 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 AP2B1P63010 937 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 GBE1Q04446 702 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 PTPN11Q06124 597 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-203ENST00000445889 STXBP2Q15833 593 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 NIM1KQ8IY84 436 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 C1orf127Q8N9H9 656 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 REPS2Q8NFH8 660 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 PCDH19Q8TAB3 1148 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 ZNF778Q96MU6 729 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 ECSITQ9BQ95 431 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 CCDC106Q9BWC9 280 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 ETNK2Q9NVF9 386 aa14.73□□□□□ -0.05
ERCC3-203ENST00000445889 HBS1LQ9Y450 684 aaKnown RBP14.73□□□□□ -0.05
ERCC3-203ENST00000445889 COL2A1P02458 1487 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-203ENST00000445889 PROCP04070 461 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 CLCN3P51790 818 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 RAP1GDS1P52306 607 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 ATXN3P54252 364 aaPredicted RBP14.72□□□□□ -0.05
ERCC3-203ENST00000445889 CDC16Q13042 620 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 OLIG2Q13516 323 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 TEX44Q53QW1 395 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 FASTKD1Q53R41 847 aaKnown RBP14.72□□□□□ -0.05
ERCC3-203ENST00000445889 DPY19L2Q6NUT2 758 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 FAM183BPQ6ZVS7 135 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 PQLC3Q8N755 202 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 STKLD1Q8NE28 680 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 DEPDC1BQ8WUY9 529 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 RNF157Q96PX1 679 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 GSTA2P09210 222 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 NCF2P19878 526 aaPredicted RBP14.72□□□□□ -0.05
ERCC3-203ENST00000445889 CYP3A5P20815 502 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 GPD2P43304 727 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 PGGT1BP53609 377 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 TAZQ16635 292 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 ATG16L1Q676U5 607 aa14.72□□□□□ -0.05
ERCC3-203ENST00000445889 ANKRD36BP1Q96IX9 119 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms