RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 SCD5Q86SK9 330 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 SYT12Q8IV01 421 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 NUSAP1Q9BXS6 441 aaKnown RBP16.27■□□□□ 0.2
SEC13-213ENST00000445064 WDR35Q9P2L0 1181 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 DNMT3LQ9UJW3 386 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 NAGPAQ9UK23 515 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 PCDHA5Q9Y5H7 936 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 ATXN2Q99700 1313 aaKnown RBP16.26■□□□□ 0.19
SEC13-213ENST00000445064 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 A0A1W2PQF6 199 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 CACNG3O60359 315 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 CISD3P0C7P0 127 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 ITPKAP23677 461 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 RPL13P26373 211 aaKnown RBP16.26■□□□□ 0.19
SEC13-213ENST00000445064 KIF11P52732 1056 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 LYSMD4Q5XG99 296 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 SDE2Q6IQ49 451 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 KRBA2Q6ZNG9 492 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 CHPFQ8IZ52 775 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
SEC13-213ENST00000445064 BHMTQ93088 406 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 EEF2KMTQ96G04 330 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 HEXIM2Q96MH2 286 aaKnown RBP16.26■□□□□ 0.19
SEC13-213ENST00000445064 DUSP16Q9BY84 665 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 NIF3L1Q9GZT8 377 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 PNPLA8Q9NP80 782 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 PLK2Q9NYY3 685 aa16.26■□□□□ 0.19
SEC13-213ENST00000445064 EVLQ9UI08 416 aaPredicted RBP16.26■□□□□ 0.19
SEC13-213ENST00000445064 AP5Z1O43299 807 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 STC2O76061 302 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 MAPK8P45983 427 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 DGKGP49619 791 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 RPL6Q02878 288 aaKnown RBP16.25■□□□□ 0.19
SEC13-213ENST00000445064 LMAN2Q12907 356 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 SPDYCQ5MJ68 293 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 KIAA1211LQ6NV74 962 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 KLHDC10Q6PID8 442 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 CCDC150Q8NCX0 1101 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 SEMA4DQ92854 862 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 P2RY11Q96G91 374 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 GOLPH3LQ9H4A5 285 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 TMEM8AQ9HCN3 771 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 FSCN3Q9NQT6 498 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 MARK1Q9P0L2 795 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 CALCOCO1Q9P1Z2 691 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 PILRBQ9UKJ0 227 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 USP3Q9Y6I4 520 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 LAMA1P25391 3075 aa16.25■□□□□ 0.19
SEC13-213ENST00000445064 MYO18AQ92614 2054 aaKnown RBP16.24■□□□□ 0.19
SEC13-213ENST00000445064 WASH3PC4AMC7 463 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 ZBTB24O43167 697 aaPredicted RBP16.24■□□□□ 0.19
SEC13-213ENST00000445064 ZNF202O95125 648 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 KLKB1P03952 638 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 CEACAM1P13688 526 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 ENGP17813 658 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 PSEN1P49768 467 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 ZNF252P-AS1Q0IIN9 211 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 FOXC1Q12948 553 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 KRT39Q6A163 491 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 SLC23A3Q6PIS1 610 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 Q6ZNB5 142 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 CCDC186Q7Z3E2 898 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 SMYD4Q8IYR2 804 aaPredicted RBP16.24■□□□□ 0.19
SEC13-213ENST00000445064 IPO4Q8TEX9 1081 aaKnown RBP16.24■□□□□ 0.19
SEC13-213ENST00000445064 DNAI2Q9GZS0 605 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 CD248Q9HCU0 757 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 RAD54BQ9Y620 910 aa16.24■□□□□ 0.19
SEC13-213ENST00000445064 TNRC6BQ9UPQ9 1833 aaKnown RBP16.24■□□□□ 0.19
SEC13-213ENST00000445064 IGHV1OR15-9A0A0B4J2B8 117 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 TOP3BO95985 862 aaKnown RBP16.23■□□□□ 0.19
SEC13-213ENST00000445064 CFIP05156 583 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 HMBSP08397 361 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 RALAP11233 206 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 NDUFV2P19404 249 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 SPINK2P20155 84 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 CSRP1P21291 193 aaKnown RBP16.23■□□□□ 0.19
SEC13-213ENST00000445064 ZNF33AQ06730 810 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 ENPEPQ07075 957 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 ZCWPW2Q504Y3 356 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 SLC36A4Q6YBV0 504 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 ZNF276Q8N554 614 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 DEFB124Q8NES8 71 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 TATDN2Q93075 761 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 TMEM176AQ96HP8 235 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 SLC6A17Q9H1V8 727 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 CD93Q9NPY3 652 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 CACNA2D2Q9NY47 1150 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 CLIC5Q9NZA1 410 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 RASAL2Q9UJF2 1139 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 FBXO10Q9UK96 956 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 CYP8B1Q9UNU6 501 aa16.23■□□□□ 0.19
SEC13-213ENST00000445064 KMT2BQ9UMN6 2715 aaPredicted RBP16.23■□□□□ 0.19
SEC13-213ENST00000445064 PLXND1Q9Y4D7 1925 aa16.22■□□□□ 0.19
SEC13-213ENST00000445064 A0A1W2PQ27 194 aa16.22■□□□□ 0.19
SEC13-213ENST00000445064 A0A1W2PQ64 194 aa16.22■□□□□ 0.19
SEC13-213ENST00000445064 A0A1W2PQD8 194 aa16.22■□□□□ 0.19
SEC13-213ENST00000445064 ZNF217O75362 1048 aa16.22■□□□□ 0.19
SEC13-213ENST00000445064 GTF2H1P32780 548 aa16.22■□□□□ 0.19
SEC13-213ENST00000445064 RAD23BP54727 409 aa16.22■□□□□ 0.19
SEC13-213ENST00000445064 MCCD1P59942 119 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms