RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 ZNF594Q96JF6 807 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CDRT15Q96T59 188 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 FRMD8P1Q9BZ68 369 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SP140LQ9H930 580 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CACYBPQ9HB71 228 aaKnown RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CCDC177Q9NQR7 707 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 KRT84Q9NSB2 600 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CHKBQ9Y259 395 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 XDHP47989 1333 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PHLPP1O60346 1717 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 LINC00854A0A1B0GVQ3 168 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 KLRF2D3W0D1 207 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PRPF4O43172 522 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 KCNQ3O43525 872 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TSPAN1O60635 241 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PRKD3O94806 890 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 RALBP11234 206 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 HNRNPH3P31942 346 aaKnown RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 THOP1P52888 689 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ECT2LQ008S8 904 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ENPEPQ07075 957 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TAF5Q15542 800 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TXNRD1Q16881 649 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TIMM50Q3ZCQ8 353 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TTC7BQ86TV6 843 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SLC26A11Q86WA9 606 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ERO1BQ86YB8 467 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 C8orf59Q8N0T1 100 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SPERTQ8NA61 448 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 HSPH1Q92598 858 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ART4Q93070 314 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PDCD10Q9BUL8 212 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 NUAK2Q9H093 628 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PUS7LQ9H0K6 701 aaKnown RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 MAGEE1Q9HCI5 957 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TMEM9Q9P0T7 183 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 UBA2Q9UBT2 640 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SUGT1Q9Y2Z0 365 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CLRN2A0PK11 232 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 F8W810 466 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 USP12O75317 370 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 LDLRP01130 860 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ENDOUP21128 410 aaKnown RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 NPTX2P47972 431 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ENTPD1P49961 510 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 HNRNPFP52597 415 aaKnown RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 HIRAP54198 1017 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TAP1Q03518 808 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 YWHAHQ04917 246 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 KCNA1Q09470 495 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ILF2Q12905 390 aaKnown RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 NCOA4Q13772 614 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 RABL6Q3YEC7 729 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 OR52E8Q6IFG1 317 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 RFWD3Q6PCD5 774 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 DSTYKQ6XUX3 929 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 KCNK18Q7Z418 384 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 NT5DC3Q86UY8 548 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 FAM47BQ8NA70 645 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 AIFM2Q9BRQ8 373 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 GDAP2Q9NXN4 497 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ITGA11Q9UKX5 1188 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SHOC2Q9UQ13 582 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 STXBP5LQ9Y2K9 1186 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SPATA31A5Q5VU36 1347 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 MROH5Q6ZUA9 1318 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SPATA31A7Q8IWB4 1347 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TECPR2O15040 1411 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 RCCD1A6NED2 376 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 DCDC2CA8MYV0 355 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 KATNA1O75449 491 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SERPINE1P05121 402 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SLC26A3P40879 764 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CACNB1Q02641 598 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PTK6Q13882 451 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CCDC142Q17RM4 750 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ARL13BQ3SXY8 428 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ANKDD1AQ495B1 522 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 BRDTQ58F21 947 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ZC3H12BQ5HYM0 836 aaKnown RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SAMD4BQ5PRF9 694 aaKnown RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TTC23Q5W5X9 447 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 XKRXQ6PP77 449 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ENOSF1Q7L5Y1 443 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PDSS2Q86YH6 399 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TBC1D10CQ8IV04 446 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PIK3C3Q8NEB9 887 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TP53INP1Q96A56 240 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ARHGEF26Q96DR7 871 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TCF12Q99081 682 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 DGCR6LQ9BY27 220 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TCF7L2Q9NQB0 619 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 DYRK4Q9NR20 520 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 EHD3Q9NZN3 535 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 APEX2Q9UBZ4 518 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PMF1-BGLAPU3KQ54 211 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 IGSF1Q8N6C5 1336 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 A0A0G2JPF8 293 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 KRT87PA6NCN2 255 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms