RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 CDK5RAP1Q96SZ6 601 aaKnown RBP14.18□□□□□ -0.14
TM9SF4-204ENST00000442842 SLC46A2Q9BY10 475 aa14.18□□□□□ -0.14
TM9SF4-204ENST00000442842 MRPL47Q9HD33 250 aaKnown RBP14.18□□□□□ -0.14
TM9SF4-204ENST00000442842 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.18□□□□□ -0.14
TM9SF4-204ENST00000442842 CTTNBP2NLQ9P2B4 639 aa14.18□□□□□ -0.14
TM9SF4-204ENST00000442842 SFMBT1Q9UHJ3 866 aa14.18□□□□□ -0.14
TM9SF4-204ENST00000442842 CPQQ9Y646 472 aa14.18□□□□□ -0.14
TM9SF4-204ENST00000442842 MYO7AQ13402 2215 aa14.18□□□□□ -0.14
TM9SF4-204ENST00000442842 C2orf16Q68DN1 1984 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 TCRBV5S1A1TA0A578 114 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 MSI1O43347 362 aaKnown RBP14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 PRAMEF12O95522 483 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 CYP1A2P05177 515 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 FYNP06241 537 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 HDCP19113 662 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 GPD1P21695 349 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 NOS2P35228 1153 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 ATP5C1P36542 298 aaKnown RBP14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 KCNQ1P51787 676 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 RPL7AP62424 266 aaKnown RBP14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 PITX1P78337 314 aaPredicted RBP14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 MAMLD1Q13495 774 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 SMAD2Q15796 467 aaKnown RBP14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 CDO1Q16878 200 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 PUS10Q3MIT2 529 aaKnown RBP14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 PPP1R15BQ5SWA1 713 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 SYPL2Q5VXT5 272 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 PLEKHA7Q6IQ23 1121 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 ZSCAN18Q8TBC5 510 aaPredicted RBP14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 ZNF564Q8TBZ8 553 aaPredicted RBP14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 RXFP2Q8WXD0 754 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 KHSRPQ92945 711 aaKnown RBP eCLIP14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 RPGRIP1Q96KN7 1286 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 OLA1Q9NTK5 396 aaKnown RBP14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 MARCH2Q9P0N8 246 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 ANAPC7Q9UJX3 599 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 TMEM59LQ9UK28 342 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 STAP1Q9ULZ2 295 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 FAM50BQ9Y247 325 aa14.17□□□□□ -0.14
TM9SF4-204ENST00000442842 MYH10P35580 1976 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 SLC12A8A0AV02 714 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 SIGLEC16A6NMB1 481 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 C2CD4DB7Z1M9 353 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 PDGFRAP16234 1089 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 SDC4P31431 198 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 RFC1P35251 1148 aaPredicted RBP14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 MATKP42679 507 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 VAV2P52735 878 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 ATP11AP98196 1134 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 NME3Q13232 169 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 C15orf59Q2T9L4 293 aaPredicted RBP14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 TRNP1Q6NT89 227 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 POTEHQ6S545 545 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 OTOP3Q7RTS5 596 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 CMTM8Q8IZV2 173 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 ACSF2Q96CM8 615 aaPredicted RBP14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 BTBD6Q96KE9 485 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 SERPINB11Q96P15 392 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 TBCBQ99426 244 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 TRIM7Q9C029 511 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 RNF38Q9H0F5 515 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 SMOC2Q9H3U7 446 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 OSGEPQ9NPF4 335 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 DDIT4Q9NX09 232 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 GDE1Q9NZC3 331 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 DNMT3LQ9UJW3 386 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 INTUQ9ULD6 942 aa14.16□□□□□ -0.14
TM9SF4-204ENST00000442842 DENND4AQ7Z401 1863 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 A0A0U1RQJ8 604 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 RCCD1A6NED2 376 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 C2CD4BA6NLJ0 364 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 TMEM110-MUSTN1A8MSY1 372 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 M0QYT0 321 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 DPYSL4O14531 572 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 SCAMP3O14828 347 aaKnown RBP14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 CCP110O43303 1012 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 OLFM2O95897 454 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 CCDC175P0C221 793 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 DESP17661 470 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 TFE3P19532 575 aaPredicted RBP14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 PSMA2P25787 234 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 NOP2P46087 812 aaKnown RBP14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 OGDHQ02218 1023 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 AAK1Q2M2I8 961 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 FAM78AQ5JUQ0 283 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 MSANTD2Q6P1R3 559 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 ARID3BQ8IVW6 561 aaPredicted RBP14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 FAM172AQ8WUF8 416 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 ATRIPQ8WXE1 791 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 RFFLQ8WZ73 363 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 ASB16Q96NS5 453 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 PHF7Q9BWX1 381 aaPredicted RBP14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.15□□□□□ -0.142e-8■■■□□ 16.3
TM9SF4-204ENST00000442842 ZMYM5Q9UJ78 669 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 CCL26Q9Y258 94 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 ADGRG1Q9Y653 693 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 GREB1Q4ZG55 1949 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 PRUNE2Q8WUY3 3088 aa14.15□□□□□ -0.14
TM9SF4-204ENST00000442842 TMEM191CA6NGB0 347 aa14.14□□□□□ -0.15
TM9SF4-204ENST00000442842 TRUB2O95900 331 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms