RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 KCNN3Q9UGI6 736 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SERTAD1Q9UHV2 236 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 TEKT2Q9UIF3 430 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 DCTN4Q9UJW0 460 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 DBR1Q9UK59 544 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 FBXL21Q9UKT6 434 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PCDHGC3Q9UN70 934 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 POLHQ9Y253 713 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 C10orf71Q711Q0 1435 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 C5orf42Q9H799 3197 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SONP18583 2426 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 N4BP2Q86UW6 1770 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 A0A0G2JND7 137 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 IQANK1A0A1B0GTG1 560 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CCDC194A0A1B0GVG4 234 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 DDTLA6NHG4 134 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 A8MXQ7 604 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 FAM155AB1AL88 458 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 ATP6V1G2-DDX39BF2Z307 99 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 H3BSA7 217 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 J3QRK9 145 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SULT1B1O43704 296 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 TLL1O43897 1013 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ZNF862O60290 1169 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 USP1O94782 785 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 HLA-DRAP01903 254 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 FUCA1P04066 466 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 S100A6P06703 90 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ALOX5P09917 674 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 MAP4P27816 1152 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 CBX5P45973 191 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PHKA2P46019 1235 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 HAAOP46952 286 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CPA2P48052 419 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 NDUFV1P49821 464 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SMCPP49901 116 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 ZNF135P52742 658 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 B2MP61769 119 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CCNA1P78396 465 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 IFI35P80217 286 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 TRADDQ15628 312 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CYP2A13Q16696 494 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 GALNTL6Q49A17 601 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ANKRD20A4Q4UJ75 823 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PXDC1Q5TGL8 231 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 HGSNATQ68CP4 663 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 RNF43Q68DV7 783 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 AKAP14Q86UN6 197 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 STX12Q86Y82 276 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SMYD4Q8IYR2 804 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 ZNF34Q8IZ26 560 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CLIP4Q8N3C7 705 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 MAGEB6Q8N7X4 407 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 Q8N9G6 341 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 CATSPER1Q8NEC5 780 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ZFP28Q8NHY6 868 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 LRRC20Q8TCA0 184 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 GDPD5Q8WTR4 605 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 KBTBD7Q8WVZ9 684 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 UTP4Q969X6 686 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 EMID1Q96A84 441 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 FBXL8Q96CD0 374 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SUCLG2Q96I99 432 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 B3GALT6Q96L58 329 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 GCNAQ96QF7 691 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 NEURL2Q9BR09 285 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 AP5M1Q9H0R1 490 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ABCG4Q9H172 646 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 HSD3B7Q9H2F3 369 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 RAVER2Q9HCJ3 691 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 MTMR10Q9NXD2 777 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 COQ3Q9NZJ6 369 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 AIPL1Q9NZN9 384 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SEPT3Q9UH03 358 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SFMBT1Q9UHJ3 866 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CAPN11Q9UMQ6 739 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 DTNAQ9Y4J8 743 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PCDHB6Q9Y5E3 794 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 RPTORQ8N122 1335 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CCDC168Q8NDH2 2452 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 LMO7Q8WWI1 1683 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 LAMB4A4D0S4 1761 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 I3L4J1 428 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 NRG2O14511 850 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 CLASP2O75122 1294 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 ZC3H11AO75152 810 aaKnown RBP eCLIP2.87□□□□□ -1.95
LIG4-203ENST00000442234 TRIM16O95361 564 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 GJB6O95452 261 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CA3P07451 260 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PTPN2P17706 415 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 VCLP18206 1134 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 POLR2CP19387 275 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 MMP13P45452 471 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 NCKAP1LP55160 1127 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ERVK-9P63128 1117 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 OTUD4Q01804 1114 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 PRKCEQ02156 737 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 MAP3K10Q02779 954 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CENPCQ03188 943 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 FOLH1Q04609 750 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms