RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 NPR1P16066 1061 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 TPP2P29144 1249 aaPredicted RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 STIP1P31948 543 aaKnown RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 ALDH1A3P47895 512 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 RAP1GDS1P52306 607 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 YWHAEP62258 255 aaKnown RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 NRF1Q16656 503 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 MAP7D1Q3KQU3 841 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 FSCBQ5H9T9 825 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 SPDYAQ5MJ70 313 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 UNC5BQ8IZJ1 945 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 FAM172AQ8WUF8 416 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 NLRP7Q8WX94 980 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 LENG1Q96BZ8 264 aaPredicted RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 AGAP3Q96P47 875 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 SERPINI1Q99574 410 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 TRPV6Q9H1D0 765 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 SSU72Q9NP77 194 aaKnown RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 NR2E3Q9Y5X4 410 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 DOT1LQ8TEK3 1739 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 SEC24DO94855 1032 aaPredicted RBP9.36□□□□□ -0.91
COPB1-202ENST00000439561 ICAM1P05362 532 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 NR3C2P08235 984 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 SPATA31D3P0C874 917 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 CSH1P0DML2 217 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 CSH2P0DML3 217 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 CCND2P30279 289 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 GMPRP36959 345 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 ZNF252P-AS1Q0IIN9 211 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 PGM5Q15124 567 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 CRY2Q49AN0 593 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 PTPN20Q4JDL3 420 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 CMPK2Q5EBM0 449 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 STRIP1Q5VSL9 837 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 SPATA31D4Q6ZUB0 917 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 ZBTB46Q86UZ6 589 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 TNS4Q8IZW8 715 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 C7orf31Q8N865 590 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 DNAAF3Q8N9W5 541 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 ZSCAN18Q8TBC5 510 aaPredicted RBP9.36□□□□□ -0.91
COPB1-202ENST00000439561 TFAP2BQ92481 460 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 ANKRD36BP1Q96IX9 119 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 CGRRF1Q99675 332 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 CCT7Q99832 543 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 HERC5Q9UII4 1024 aaKnown RBP9.36□□□□□ -0.91
COPB1-202ENST00000439561 ADAMTS6Q9UKP5 1117 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 GINS2Q9Y248 185 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 COL22A1Q8NFW1 1626 aaPredicted RBP9.36□□□□□ -0.91
COPB1-202ENST00000439561 C10orf71Q711Q0 1435 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 DHX15O43143 795 aaKnown RBP9.36□□□□□ -0.91
COPB1-202ENST00000439561 ZNF862O60290 1169 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 TMCC1O94876 653 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 APOEP02649 317 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 HMGCRP04035 888 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 BPGMP07738 259 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 FGFR3P22607 806 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 ADARP55265 1226 aaKnown RBP9.36□□□□□ -0.91
COPB1-202ENST00000439561 ANKRD20A4Q4UJ75 823 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 SH3PXD2AQ5TCZ1 1133 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 LRRC38Q5VT99 294 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 B3GNT6Q6ZMB0 384 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 MYLK4Q86YV6 388 aaPredicted RBP9.36□□□□□ -0.91
COPB1-202ENST00000439561 MARK4Q96L34 752 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 PDCD2LQ9BRP1 358 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 IDI2Q9BXS1 227 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 SEMA6AQ9H2E6 1030 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 CDH22Q9UJ99 828 aa9.36□□□□□ -0.91
COPB1-202ENST00000439561 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
COPB1-202ENST00000439561 SIN3BO75182 1162 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 MMP10P09238 476 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 RGS2P41220 211 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 HDAC4P56524 1084 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 YWHAZP63104 245 aaKnown RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 TBCCQ15814 346 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 SCARA3Q6AZY7 606 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 DRICH1Q6PGQ1 229 aaPredicted RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 CCDC60Q8IWA6 550 aaPredicted RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 CCNYL1Q8N7R7 359 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 ADAM32Q8TC27 787 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 CDRT15Q96T59 188 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 LMCD1Q9NZU5 365 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 USP21Q9UK80 565 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 POMPQ9Y244 141 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 SPATA31A6Q5VVP1 1343 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 ZNF541Q9H0D2 1346 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 CNTNAP2Q9UHC6 1331 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 WDR27A2RRH5 827 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 TPP1O14773 563 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 ITGA2BP08514 1039 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 RALBP11234 206 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 MX2P20592 715 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 ACO1P21399 889 aaKnown RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 CRABP2P29373 138 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 ACTR2P61160 394 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 C6orf52Q5T4I8 152 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 HEATR6Q6AI08 1181 aaKnown RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 SNX32Q86XE0 403 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 PDSS2Q86YH6 399 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 TTC16Q8NEE8 873 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 RXFP2Q8WXD0 754 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms