RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 ORC1Q13415 861 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 LY6G5CQ5SRR4 150 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 BTBD8Q5XKL5 378 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 ARHGAP17Q68EM7 881 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 TCEAL6Q6IPX3 200 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 NUDT18Q6ZVK8 323 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 CCDC186Q7Z3E2 898 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 TADA2BQ86TJ2 420 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 RASSF3Q86WH2 238 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 ETFBKMTQ8IXQ9 262 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 TCEAL3Q969E4 200 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 TMEM176AQ96HP8 235 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 CDK5RAP1Q96SZ6 601 aaKnown RBP12.09□□□□□ -0.47
IRF1-204ENST00000439555 KLF16Q9BXK1 252 aaPredicted RBP12.09□□□□□ -0.47
IRF1-204ENST00000439555 METTL14Q9HCE5 456 aaKnown RBP12.09□□□□□ -0.47
IRF1-204ENST00000439555 SPHK2Q9NRA0 654 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 CISHQ9NSE2 258 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 CLIC5Q9NZA1 410 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 DNMT3LQ9UJW3 386 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 MMP17Q9ULZ9 603 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 ADAMTS9Q9P2N4 1935 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 H0Y626 953 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 GREM1O60565 184 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 TRIM16O95361 564 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 TOP3BO95985 862 aaKnown RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 CAPNS1P04632 268 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 CD58P19256 250 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 SPINK2P20155 84 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 ACO1P21399 889 aaKnown RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 KIR2DL1P43626 348 aaPredicted RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 PLA2G4AP47712 749 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 SLC6A11P48066 632 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 PGFP49763 221 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 RAD23BP54727 409 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 STIM1Q13586 685 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 CRY1Q16526 586 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 USP39Q53GS9 565 aaKnown RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 C2orf27AQ580R0 203 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 PPP1R26Q5T8A7 1209 aaPredicted RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 ANKRD40Q6AI12 368 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 GPRIN1Q7Z2K8 1008 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 BBS7Q8IWZ6 715 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 PHTF2Q8N3S3 785 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 TSTD1Q8NFU3 115 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 EEF2KMTQ96G04 330 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 DHTKD1Q96HY7 919 aaPredicted RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 CNOT6LQ96LI5 555 aaKnown RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 HEXIM2Q96MH2 286 aaKnown RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 HHIPQ96QV1 700 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 MMRN2Q9H8L6 949 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.08□□□□□ -0.48
IRF1-204ENST00000439555 ARHGEF4Q9NR80 690 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
IRF1-204ENST00000439555 WDR35Q9P2L0 1181 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 DEC1Q9P2X7 70 aa12.08□□□□□ -0.48
IRF1-204ENST00000439555 ARMCX3Q9UH62 379 aaPredicted RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 GCN1Q92616 2671 aaKnown RBP12.08□□□□□ -0.48
IRF1-204ENST00000439555 ITPR1Q14643 2758 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 UPK3BL1B0FP48 263 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 UPK3BL2E5RIL1 263 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 PSMA7O14818 248 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 CYP26A1O43174 497 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 ALDH1A2O94788 518 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 TBX18O95935 607 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 RALAP11233 206 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 RARGP13631 454 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 RDXP35241 583 aaKnown RBP12.07□□□□□ -0.48
IRF1-204ENST00000439555 PMS1P54277 932 aaKnown RBP12.07□□□□□ -0.48
IRF1-204ENST00000439555 SLC8A3P57103 927 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 YWHAEP62258 255 aaKnown RBP12.07□□□□□ -0.48
IRF1-204ENST00000439555 CBWD6Q4V339 395 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 CBWD3Q5JTY5 395 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 EOGTQ5NDL2 527 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 CBWD5Q5RIA9 395 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 TRMT11Q7Z4G4 463 aaKnown RBP12.07□□□□□ -0.48
IRF1-204ENST00000439555 C12orf40Q86WS4 652 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 TMEM25Q86YD3 366 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 ARHGAP18Q8N392 663 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 IL17RCQ8NAC3 791 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 ANKRD52Q8NB46 1076 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 SLC4A11Q8NBS3 891 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 CEP63Q96MT8 703 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 SLC32A1Q9H598 525 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 NMUR1Q9HB89 426 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 POLR3BQ9NW08 1133 aaPredicted RBP12.07□□□□□ -0.48
IRF1-204ENST00000439555 OSER1Q9NX31 292 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 MARK1Q9P0L2 795 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 EVLQ9UI08 416 aaPredicted RBP12.07□□□□□ -0.48
IRF1-204ENST00000439555 LSM7Q9UK45 103 aaKnown RBP12.07□□□□□ -0.48
IRF1-204ENST00000439555 KIAA1257Q9ULG3 409 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 STARD13Q9Y3M8 1113 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 PLXNB3Q9ULL4 1909 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 LOC400499M0QZD8 3231 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 SHROOM3Q8TF72 1996 aa12.07□□□□□ -0.48
IRF1-204ENST00000439555 A0A1W2PQH9 124 aa12.06□□□□□ -0.48
IRF1-204ENST00000439555 TBC1D3BA6NDS4 549 aa12.06□□□□□ -0.48
IRF1-204ENST00000439555 SCAMP3O14828 347 aaKnown RBP12.06□□□□□ -0.48
IRF1-204ENST00000439555 CACNG3O60359 315 aa12.06□□□□□ -0.48
IRF1-204ENST00000439555 TULP3O75386 442 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms