RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 STIP1P31948 543 aaKnown RBP8.89□□□□□ -0.99
HPS4-206ENST00000439453 GJA9P57773 515 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 SNRPFP62306 86 aaKnown RBP8.89□□□□□ -0.99
HPS4-206ENST00000439453 GTF2BQ00403 316 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 SLC18A2Q05940 514 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 PTK7Q13308 1070 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 LPCAT4Q643R3 524 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 SPOCD1Q6ZMY3 1216 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 PPIL6Q8IXY8 311 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 GSTCDQ8NEC7 633 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 PYDC1Q8WXC3 89 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 ZNF577Q9BSK1 485 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 KLHL4Q9C0H6 718 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 PCDHB2Q9Y5E7 798 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 IPO5O00410 1097 aaKnown RBP8.88□□□□□ -0.99
HPS4-206ENST00000439453 PFDN1O60925 122 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 DUSP11O75319 330 aaKnown RBP8.88□□□□□ -0.99
HPS4-206ENST00000439453 PGK1P00558 417 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 SETSIPP0DME0 302 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 MAGEA8P43361 318 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 ITGA9Q13797 1035 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 SH2D5Q6ZV89 423 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 ENOSF1Q7L5Y1 443 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 CPT1BQ92523 772 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 NKD2Q969F2 451 aaPredicted RBP8.88□□□□□ -0.99
HPS4-206ENST00000439453 DGCR14Q96DF8 476 aaKnown RBP8.88□□□□□ -0.99
HPS4-206ENST00000439453 CCDC106Q9BWC9 280 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 TEKT3Q9BXF9 490 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 WWP1Q9H0M0 922 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 A0A088AWK7 358 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 SLC16A4O15374 487 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 ARP10275 920 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 ITGB5P18084 799 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 AQP4P55087 323 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 BPIFB4P59827 614 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 GCNT1Q02742 428 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 FAAP100Q0VG06 881 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 DLG1Q12959 904 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 PDK3Q15120 406 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 BBS9Q3SYG4 887 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 DUSP28Q4G0W2 176 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 ACBD5Q5T8D3 534 aaPredicted RBP8.88□□□□□ -0.99
HPS4-206ENST00000439453 PLEKHA7Q6IQ23 1121 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 RNF111Q6ZNA4 994 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 SV2AQ7L0J3 742 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 PASD1Q8IV76 773 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 ARID3BQ8IVW6 561 aaPredicted RBP8.88□□□□□ -0.99
HPS4-206ENST00000439453 SHKBP1Q8TBC3 707 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 LZICQ8WZA0 190 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 TMEM106CQ9BVX2 250 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 C1orf21Q9H246 121 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 C17orf75Q9HAS0 396 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 PTTG2Q9NZH5 202 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 CIDEBQ9UHD4 219 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 MYH9P35579 1960 aaKnown RBP8.88□□□□□ -0.99
HPS4-206ENST00000439453 TTC36A6NLP5 189 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 MSCO60682 206 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 CHN2P52757 468 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 ALDH18A1P54886 795 aaKnown RBP8.88□□□□□ -0.99
HPS4-206ENST00000439453 XIAPP98170 497 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 PDE1BQ01064 536 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 ARHGAP1Q07960 439 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 MTM1Q13496 603 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 TBCCQ15814 346 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 MMEL1Q495T6 779 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 TMEM259Q4ZIN3 620 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 EFHC1Q5JVL4 640 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 ARHGEF16Q5VV41 709 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 GDPD5Q8WTR4 605 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 C7orf26Q96N11 449 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 RHBDL2Q9NX52 303 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 ADAMTS6Q9UKP5 1117 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 IKBKGQ9Y6K9 419 aa8.88□□□□□ -0.99
HPS4-206ENST00000439453 hCG_2014768A0A024R1R8 64 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 ARHGAP42A6NI28 874 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 MEI4A8MW99 385 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 PRR5-ARHGAP8B1AHC4 643 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 E7ESA3 106 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 DDX39AO00148 427 aaKnown RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 CFHP08603 1231 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 CCDC166P0CW27 439 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 TPP2P29144 1249 aaPredicted RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 SSTR3P32745 418 aaPredicted RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 ARHGAP8P85298 464 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 BST1Q10588 318 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 HIC1Q14526 733 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 LY6KQ17RY6 165 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 CEP55Q53EZ4 464 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 TAB3Q8N5C8 712 aaPredicted RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 NAT8LQ8N9F0 302 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 FEZF2Q8TBJ5 459 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 PIP4K2CQ8TBX8 421 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 POMGNT1Q8WZA1 660 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 ACAP3Q96P50 834 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 XPNPEP3Q9NQH7 507 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 IP6K2Q9UHH9 426 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 CHMP2BQ9UQN3 213 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 PPME1Q9Y570 386 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 UBIAD1Q9Y5Z9 338 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms