RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TFPTP0C1Z6 253 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 CCR3P51677 355 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 CDC16Q13042 620 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 PTK6Q13882 451 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 PDCD2Q16342 344 aaPredicted RBP10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 KIZQ2M2Z5 673 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 MTHFD1LQ6UB35 978 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 MON1BQ7L1V2 547 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 ULK2Q8IYT8 1036 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 NDUFAF2Q8N183 169 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 KLRG1Q96E93 195 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 KANSL3Q9P2N6 904 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 PLA2G6O60733 806 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 CALB1P05937 261 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 RAG1P15918 1043 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 SERPINB5P36952 375 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 TGFB2P61812 414 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 CCNG2Q16589 344 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 DBN1Q16643 649 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 PTPN20Q4JDL3 420 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 SFT2D3Q587I9 215 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 ACOT1Q86TX2 421 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 IGDCC3Q8IVU1 814 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 SCUBE3Q8IX30 993 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 RCOR2Q8IZ40 523 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 DEFB107AQ8IZN7 70 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 GDPD5Q8WTR4 605 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 KIF12Q96FN5 646 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 PANX3Q96QZ0 392 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 MINDY3Q9H8M7 445 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 SLC7A8Q9UHI5 535 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 PCDHGB4Q9UN71 923 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 COQ4Q9Y3A0 265 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 PCDHGB5Q9Y5G0 923 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 BRWD3Q6RI45 1802 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 C19orf81C9J6K1 198 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 OGTO15294 1046 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 KCNN4O15554 427 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 PRPSAP2O60256 369 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 CSPG5O95196 566 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 NPTXRO95502 500 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 LCP1P13796 627 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 RPL10P27635 214 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 PSMD7P51665 324 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 INHBCP55103 352 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 CENPCQ03188 943 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 WASHC2DQ5SRD0 308 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 ARHGAP24Q8N264 748 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 SLITRK1Q96PX8 696 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 ECSITQ9BQ95 431 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 RNPEPQ9H4A4 650 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 CCDC134Q9H6E4 229 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 SOWAHBA6NEL2 793 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 FARP2O94887 1054 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 ZWINTO95229 277 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 MRPS22P82650 360 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 HIC1Q14526 733 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 LAYNQ6UX15 382 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 UNC45BQ8IWX7 931 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 CCNYQ8ND76 341 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 SRPK1Q96SB4 655 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 CPXM1Q96SM3 734 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 VPS11Q9H270 941 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 ARHGEF38Q9NXL2 777 aa10.3□□□□□ -0.76
CDC42SE1-202ENST00000439374 LACTBL1A8MY62 500 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 HCRTO43612 131 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 TPST1O60507 370 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 STAG3L1P0CL83 205 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 ENO3P13929 434 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 INSRRP14616 1297 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 GCAP28676 217 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 PHBP35232 272 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 GPX6P59796 221 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 CDK16Q00536 496 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 PARP6Q2NL67 630 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 LIN52Q52LA3 116 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 TFDP3Q5H9I0 405 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 PPP1R2P3Q6NXS1 205 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 MYLK4Q86YV6 388 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 EXD1Q8NHP7 514 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 INPP5DQ92835 1189 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 TWNKQ96RR1 684 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 NTPCRQ9BSD7 190 aaKnown RBP10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 DHX35Q9H5Z1 703 aaKnown RBP10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 RNF181Q9P0P0 153 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 SMG5Q9UPR3 1016 aaKnown RBP10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 A0A1B0GTW7 788 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 LIASO43766 372 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 ACO1P21399 889 aaKnown RBP10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 RABGGTBP53611 331 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 SESN2P58004 480 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 PDE1BQ01064 536 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 SLC5A9Q2M3M2 681 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 TMEM259Q4ZIN3 620 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 SLC45A4Q5BKX6 768 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 JADE1Q6IE81 842 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 DPP9Q86TI2 863 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 NME8Q8N427 588 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 ATP11CQ8NB49 1132 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 BBOF1Q8ND07 529 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms