RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 SNRPAP09012 282 aaKnown RBP17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 MYL2P10916 166 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 ATICP31939 592 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 SREBF2Q12772 1141 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 TMEM132AQ24JP5 1023 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 TSNAXIP1Q2TAA8 658 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 TRIM68Q6AZZ1 485 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 JADE1Q6IE81 842 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 ANO7Q6IWH7 933 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 C1orf228Q6PIY5 440 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 PAXIP1Q6ZW49 1069 aaPredicted RBP17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 PLD5Q8N7P1 536 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 PPM1NQ8N819 430 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 APBB2Q92870 758 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 SPDL1Q96EA4 605 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 ZNF668Q96K58 619 aaPredicted RBP17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 ZFATQ9P243 1243 aa17.02■□□□□ 0.31
CLCNKA-203ENST00000439316 CXorf49A8MYA2 514 aaPredicted RBP17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 GPR25O00155 361 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 TRDMT1O14717 391 aaKnown RBP17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 KCNN4O15554 427 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 PRPSAP2O60256 369 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 KRT37O76014 449 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 PDGFRAP16234 1089 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 TGM2P21980 687 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 CRHR2Q13324 411 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 PDK2Q15119 407 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 C15orf59Q2T9L4 293 aaPredicted RBP17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 FAM183BPQ6ZVS7 135 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 TTC7BQ86TV6 843 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 CAND1Q86VP6 1230 aaKnown RBP17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 TRIM42Q8IWZ5 723 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 UBA3Q8TBC4 463 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 DNAJC9Q8WXX5 260 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 C7orf26Q96N11 449 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 TINF2Q9BSI4 451 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 IQCGQ9H095 443 aaKnown RBP17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 MINDY3Q9H8M7 445 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 ZFYVE28Q9HCC9 887 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 ARHGEF4Q9NR80 690 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 TAS2R1Q9NYW7 299 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 ZC3H7BQ9UGR2 993 aaKnown RBP17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 PLLPQ9Y342 182 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 ZNF236Q9UL36 1845 aa17.01■□□□□ 0.31
CLCNKA-203ENST00000439316 FAM237BA0A1B0GVD1 139 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 BCLAF3A2AJT9 711 aaKnown RBP17■□□□□ 0.31
CLCNKA-203ENST00000439316 C2orf71A6NGG8 1288 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 DPYSL4O14531 572 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 SKAP2O75563 359 aaPredicted RBP17■□□□□ 0.31
CLCNKA-203ENST00000439316 NEBLO76041 1014 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 RARBP10826 455 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 CYP3A5P20815 502 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 IL4RP24394 825 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 ADCYAP1R1P41586 468 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 KRT81Q14533 505 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 ACSBG2Q5FVE4 666 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 MORN1Q5T089 497 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 APBB1IPQ7Z5R6 666 aaPredicted RBP17■□□□□ 0.31
CLCNKA-203ENST00000439316 MAP7D3Q8IWC1 876 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 CTAGE3PQ8IX95 158 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 LMNTD2Q8IXW0 634 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 PQLC3Q8N755 202 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 TRAPPC12Q8WVT3 735 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 USP6NLQ92738 828 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 PIWIL1Q96J94 861 aaKnown RBP17■□□□□ 0.31
CLCNKA-203ENST00000439316 ZNF333Q96JL9 665 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 KCNK4Q9NYG8 393 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 APOL1O14791 398 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 GSTA2P09210 222 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 STAG3L1P0CL83 205 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 ESRRAP11474 423 aaPredicted RBP17■□□□□ 0.31
CLCNKA-203ENST00000439316 VHLP40337 213 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 MRPS5P82675 430 aaKnown RBP17■□□□□ 0.31
CLCNKA-203ENST00000439316 ARHGAP1Q07960 439 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 INCA1Q0VD86 236 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 KPNB1Q14974 876 aaKnown RBP17■□□□□ 0.31
CLCNKA-203ENST00000439316 RCN1Q15293 331 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 SLC9A4Q6AI14 798 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 OR6B2Q6IFH4 312 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 TEKT4Q8WW24 435 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 MCUR1Q96AQ8 359 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 HEXIM2Q96MH2 286 aaKnown RBP17■□□□□ 0.31
CLCNKA-203ENST00000439316 NMUR2Q9GZQ4 415 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 MIS12Q9H081 205 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 KLC2Q9H0B6 622 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 ETNK2Q9NVF9 386 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 NMRK1Q9NWW6 199 aa17■□□□□ 0.31
CLCNKA-203ENST00000439316 ZSWIM8A7E2V4 1837 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 RBM47A0AV96 593 aaKnown RBP16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 I3L4J1 428 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 NVLO15381 856 aaKnown RBP16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 RFPL1O75677 317 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 TOMM70O94826 608 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 ZBED1O96006 694 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 IQCF3P0C7M6 154 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 P4HA1P13674 534 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 RBL1P28749 1068 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 TM4SF4P48230 202 aa16.99■□□□□ 0.31
CLCNKA-203ENST00000439316 CLCN3P51790 818 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms