RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 MCF2LO15068 1137 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 RIPK2O43353 540 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 HTRA2O43464 458 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 STX6O43752 255 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 NEMFO60524 1076 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 KINO60870 393 aaKnown RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 KERAO60938 352 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 RTN2O75298 545 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 AFPP02771 609 aaKnown RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 HEXBP07686 556 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 SNRPA1P09661 255 aaKnown RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 NEFHP12036 1026 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 LAMP2P13473 410 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 PTPN1P18031 435 aaKnown RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 PTGS1P23219 599 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 AOAHP28039 575 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 CIITAP33076 1130 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 THPOP40225 353 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 RGS2P41220 211 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 SULT1E1P49888 294 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZNF41P51814 821 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 MAP2K6P52564 334 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 PNLIPRP1P54315 467 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 GBE1Q04446 702 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 STK4Q13043 487 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 CUL4BQ13620 913 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 LASP1Q14847 261 aaKnown RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 CNGA2Q16280 664 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 FSCN1Q16658 493 aaKnown RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 ARHGAP44Q17R89 818 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 C3orf36Q3SXR2 165 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 KRBOX4Q5JUW0 171 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCDC183Q5T5S1 534 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 NFRKBQ6P4R8 1299 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 C11orf88Q6PI97 169 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 FRMD7Q6ZUT3 714 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 BBS12Q6ZW61 710 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 PXKQ7Z7A4 578 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 GLRX5Q86SX6 157 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 TTC7BQ86TV6 843 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 SRBD1Q8N5C6 995 aaKnown RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 CISD2Q8N5K1 135 aaKnown RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 C2orf69Q8N8R5 385 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 ATP11CQ8NB49 1132 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 GPR150Q8NGU9 434 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 CEP76Q8TAP6 659 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 GRK7Q8WTQ7 553 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 CTNNBL1Q8WYA6 563 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 FAM120BQ96EK7 910 aaKnown RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 CFAP36Q96G28 342 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 AK8Q96MA6 479 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 COG8Q96MW5 612 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZNF396Q96N95 335 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 NEK1Q96PY6 1258 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 UIMC1Q96RL1 719 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 TWNKQ96RR1 684 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 ELF4Q99607 663 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZFYVE21Q9BQ24 234 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCDC94Q9BW85 323 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 SLC7A5P2Q9GIP4 190 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 NT5C3AQ9H0P0 336 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 NDST4Q9H3R1 872 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 NCOR1P1Q9H4R4 102 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 THAP9Q9H5L6 903 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 RABEP2Q9H5N1 569 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZMAT4Q9H898 229 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 ARMT1Q9H993 441 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 ERVK-5Q9HDB9 667 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 SAYSD1Q9NPB0 183 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 TCF7L2Q9NQB0 619 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 SEPT11Q9NVA2 429 aaKnown RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 PTGFRNQ9P2B2 879 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZNF215Q9UL58 517 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 KIF3AQ9Y496 699 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 USP15Q9Y4E8 981 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 CYP46A1Q9Y6A2 500 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 A0A0U1RQK1 487 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 A0A1W2PRX2 142 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZNF320A2RRD8 509 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 FAM90A27PA6NNH2 459 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 LACTBL1A8MY62 500 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 H0YAE9 185 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 H7C1D1 291 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 WNT9AO14904 365 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 HNRNPDLO14979 420 aaKnown RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 KIAA0355O15063 1070 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 PHGDHO43175 533 aaKnown RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCP110O43303 1012 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 ADAM20O43506 726 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 FAM20BO75063 409 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 E2F6O75461 281 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 TSPAN9O75954 239 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 CAMTA2O94983 1202 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 OPN1MWP04001 364 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 MMEP08473 750 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 PDHA1P08559 390 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 DLDP09622 509 aaKnown RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 TMIGD3P0DMS9 266 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 OPN1MW2P0DN77 364 aa3.89□□□□□ -1.79
HMGB1P12-201ENST00000438594 OPN1MW3P0DN78 364 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms