RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 THEGQ9P2T0 379 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 MYO1AQ9UBC5 1043 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 ADGRG1Q9Y653 693 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 DOCK6Q96HP0 2047 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 GRXCR2A6NFK2 248 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 C2CD4BA6NLJ0 364 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 DPYSL4O14531 572 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 COCHO43405 550 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 MTA2O94776 668 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 HDCP19113 662 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 GPD1P21695 349 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 SDC4P31431 198 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 GBP1P32455 592 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 HADHBP55084 474 aaKnown RBP19.22■□□□□ 0.67
HDAC6-208ENST00000438518 KIF5AQ12840 1032 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 MTA1Q13330 715 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 ACAP1Q15027 740 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 TAF5Q15542 800 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 DCAF6Q58WW2 860 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 C10orf120Q5SQS8 335 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 TXNDC8Q6A555 127 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 ZNF662Q6ZS27 426 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 DDX42Q86XP3 938 aaKnown RBP eCLIP19.22■□□□□ 0.67
HDAC6-208ENST00000438518 CMTM8Q8IZV2 173 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 KIAA1958Q8N8K9 716 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 MAB21L3Q8N8X9 362 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 ACRBPQ8NEB7 543 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 NT5C3BQ969T7 300 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 PGAP3Q96FM1 320 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-208ENST00000438518 MCEEQ96PE7 176 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 NUP85Q9BW27 656 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 KCNF1Q9H3M0 494 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 SLITRK6Q9H5Y7 841 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 CCSER2Q9H7U1 834 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 TRPC7Q9HCX4 862 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 CTTNBP2NLQ9P2B4 639 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 REXO2Q9Y3B8 237 aaKnown RBP19.22■□□□□ 0.67
HDAC6-208ENST00000438518 PAXBP1Q9Y5B6 917 aa19.22■□□□□ 0.67
HDAC6-208ENST00000438518 C2orf78A6NCI8 922 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 TMEM191CA6NGB0 347 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 ATMINO43313 823 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-208ENST00000438518 GRAP2O75791 330 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 F9P00740 461 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 CKMP06732 381 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 TCF3P15923 654 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 PDGFRAP16234 1089 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 GJA1P17302 382 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 RFC1P35251 1148 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-208ENST00000438518 FLT3P36888 993 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 PGFP49763 221 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 ZNF143P52747 638 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-208ENST00000438518 COG7P83436 770 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 SLC25A52Q3SY17 297 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 HS1BP3Q53T59 392 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 STRADAQ7RTN6 431 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 DNAAF5Q86Y56 855 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-208ENST00000438518 ZNF564Q8TBZ8 553 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-208ENST00000438518 DQX1Q8TE96 717 aaKnown RBP19.21■□□□□ 0.67
HDAC6-208ENST00000438518 EDEM1Q92611 657 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 E2F7Q96AV8 911 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 ARHGEF26Q96DR7 871 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 NPY6RQ99463 290 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 PHF7Q9BWX1 381 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-208ENST00000438518 SLC46A2Q9BY10 475 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 OBP2AQ9NY56 170 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 MARCH2Q9P0N8 246 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 ARHGAP26Q9UNA1 814 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 NAALADL1Q9UQQ1 740 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 HBS1LQ9Y450 684 aaKnown RBP19.21■□□□□ 0.67
HDAC6-208ENST00000438518 NR2E1Q9Y466 385 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 EYSQ5T1H1 3165 aa19.21■□□□□ 0.67
HDAC6-208ENST00000438518 FAM170AA1A519 330 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 KRT86O43790 486 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 IGLV3-25P01717 112 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 ARHGAP25P42331 645 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 RNASE9P60153 205 aaKnown RBP19.2■□□□□ 0.66
HDAC6-208ENST00000438518 RPL7AP62424 266 aaKnown RBP19.2■□□□□ 0.66
HDAC6-208ENST00000438518 PIGHQ14442 188 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-208ENST00000438518 IFI16Q16666 785 aaKnown RBP19.2■□□□□ 0.66
HDAC6-208ENST00000438518 SYPL2Q5VXT5 272 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 PTCRAQ6ISU1 281 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-208ENST00000438518 PLCD3Q8N3E9 789 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 JOSD2Q8TAC2 188 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 RXFP2Q8WXD0 754 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 DESI2Q9BSY9 194 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 CNPY3Q9BT09 278 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 TRPV4Q9HBA0 871 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 IP6K2Q9UHH9 426 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 CDH22Q9UJ99 828 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 RASAL2Q9UJF2 1139 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 ANAPC7Q9UJX3 599 aa19.2■□□□□ 0.66
HDAC6-208ENST00000438518 MYO1FO00160 1098 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 CCP110O43303 1012 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 ZSCAN12O43309 604 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 ENDOD1O94919 500 aa19.19■□□□□ 0.66
HDAC6-208ENST00000438518 TRUB2O95900 331 aaKnown RBP19.19■□□□□ 0.66
HDAC6-208ENST00000438518 MBL2P11226 248 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-208ENST00000438518 GBP2P32456 591 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-208ENST00000438518 SULT1E1P49888 294 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms