RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 MAGEA9P43362 315 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 SOX9P48436 509 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 UBASH3AP57075 661 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 FANCCQ00597 558 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 PDCLQ13371 301 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 PASD1Q8IV76 773 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 WDTC1Q8N5D0 677 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 TMEM105Q8N8V8 129 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 EDEM1Q92611 657 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 SYNCQ9H7C4 482 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 CYTH4Q9UIA0 394 aa17.14■□□□□ 0.33
CTSD-205ENST00000438213 NDRG2Q9UN36 371 aaKnown RBP17.14■□□□□ 0.33
CTSD-205ENST00000438213 SLC12A8A0AV02 714 aa17.13■□□□□ 0.33
CTSD-205ENST00000438213 OTOL1A6NHN0 477 aaPredicted RBP17.13■□□□□ 0.33
CTSD-205ENST00000438213 E5RJQ4 531 aa17.13■□□□□ 0.33
CTSD-205ENST00000438213 DCNP07585 359 aaKnown RBP17.13■□□□□ 0.33
CTSD-205ENST00000438213 COL9A1P20849 921 aa17.13■□□□□ 0.33
CTSD-205ENST00000438213 TAF3Q5VWG9 929 aa17.13■□□□□ 0.33
CTSD-205ENST00000438213 MSANTD4Q8NCY6 345 aa17.13■□□□□ 0.33
CTSD-205ENST00000438213 IPO4Q8TEX9 1081 aaKnown RBP17.13■□□□□ 0.33
CTSD-205ENST00000438213 FAM149B1Q96BN6 582 aa17.13■□□□□ 0.33
CTSD-205ENST00000438213 MYO6Q9UM54 1294 aa17.13■□□□□ 0.33
CTSD-205ENST00000438213 HBS1LQ9Y450 684 aaKnown RBP17.13■□□□□ 0.33
CTSD-205ENST00000438213 MTF2Q9Y483 593 aaPredicted RBP17.13■□□□□ 0.33
CTSD-205ENST00000438213 SHISA7A6NL88 538 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 CAPN9O14815 690 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 PAPSS1O43252 624 aaPredicted RBP17.12■□□□□ 0.33
CTSD-205ENST00000438213 LSM8O95777 96 aaKnown RBP17.12■□□□□ 0.33
CTSD-205ENST00000438213 ADH1CP00326 375 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 TARSP26639 723 aaKnown RBP17.12■□□□□ 0.33
CTSD-205ENST00000438213 CDH5P33151 784 aaPredicted RBP17.12■□□□□ 0.33
CTSD-205ENST00000438213 GJA4P35212 333 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 GRSF1Q12849 480 aaKnown RBP eCLIP17.12■□□□□ 0.33
CTSD-205ENST00000438213 PON2Q15165 354 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 DHCR24Q15392 516 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 EFHC1Q5JVL4 640 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 DGKKQ5KSL6 1271 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 BEND5Q7L4P6 421 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 NOP9Q86U38 636 aaKnown RBP17.12■□□□□ 0.33
CTSD-205ENST00000438213 ERICH1Q86X53 443 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 BBS7Q8IWZ6 715 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 C1orf131Q8NDD1 294 aaKnown RBP17.12■□□□□ 0.33
CTSD-205ENST00000438213 EPS8L1Q8TE68 723 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 CLEC4CQ8WTT0 213 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 DDX1Q92499 740 aaKnown RBP17.12■□□□□ 0.33
CTSD-205ENST00000438213 CLDN23Q96B33 292 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 CPXM1Q96SM3 734 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 EDEM3Q9BZQ6 932 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 LMAN1LQ9HAT1 526 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 MYO16Q9Y6X6 1858 aa17.12■□□□□ 0.33
CTSD-205ENST00000438213 TICRRQ7Z2Z1 1910 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 TRDMT1O14717 391 aaKnown RBP17.11■□□□□ 0.33
CTSD-205ENST00000438213 SCAMP3O14828 347 aaKnown RBP17.11■□□□□ 0.33
CTSD-205ENST00000438213 STC2O76061 302 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 TPM3P06753 285 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 GLI1P08151 1106 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 HMBSP08397 361 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 NCAM1P13591 858 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 FERP16591 822 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 RPS9P46781 194 aaKnown RBP17.11■□□□□ 0.33
CTSD-205ENST00000438213 HARS2P49590 506 aaKnown RBP17.11■□□□□ 0.33
CTSD-205ENST00000438213 YWHAZP63104 245 aaKnown RBP17.11■□□□□ 0.33
CTSD-205ENST00000438213 CDR2Q01850 454 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 LRRC32Q14392 662 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 OR6B2Q6IFH4 312 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 MSANTD2Q6P1R3 559 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 RHBDF2Q6PJF5 856 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 ZDHHC17Q8IUH5 632 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 CCDC105Q8IYK2 499 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 DTWD2Q8NBA8 298 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 WBP2Q969T9 261 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 PLD4Q96BZ4 506 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 NUP58Q9BVL2 599 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 POPDC2Q9HBU9 364 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 ASNSD1Q9NWL6 643 aa17.11■□□□□ 0.33
CTSD-205ENST00000438213 HELZP42694 1942 aaKnown RBP17.1■□□□□ 0.33
CTSD-205ENST00000438213 GALR2O43603 387 aaPredicted RBP17.1■□□□□ 0.33
CTSD-205ENST00000438213 GREM1O60565 184 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 CYP17A1P05093 508 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 MMEP08473 750 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 CHKAP35790 457 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 GALK1P51570 392 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 ARID5AQ03989 594 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 GAD2Q05329 585 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 TXNDC11Q6PKC3 985 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 TRIM72Q6ZMU5 477 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 TOGARAM2Q6ZUX3 1019 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 ZNF687Q8N1G0 1237 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 SYNPOQ8N3V7 929 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 CD101Q93033 1021 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 C18orf8Q96DM3 657 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 P2RY13Q9BPV8 354 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 IRF2BPLQ9H1B7 796 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 SPHK2Q9NRA0 654 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 DLGAP2Q9P1A6 1054 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 WDR35Q9P2L0 1181 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 SFMBT1Q9UHJ3 866 aa17.1■□□□□ 0.33
CTSD-205ENST00000438213 NOCTQ9UK39 431 aaKnown RBP17.1■□□□□ 0.33
CTSD-205ENST00000438213 ARIH1Q9Y4X5 557 aaPredicted RBP17.1■□□□□ 0.33
CTSD-205ENST00000438213 CHRNB1P11230 501 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms