RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 FNDC1Q4ZHG4 1894 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-208ENST00000436638 PTPRSQ13332 1948 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 CENPFP49454 3210 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 FAM170AA1A519 330 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 BOLA2-SMG1P6H3BVE0 249 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 I3L4J1 428 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 CYB561D2O14569 222 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 PPEF2O14830 753 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 SYN3O14994 580 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 PMM2O15305 246 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 B4GALT3O60512 393 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 ECEL1O95672 775 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 CXCL14O95715 111 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 SOD2P04179 222 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 TYMPP19971 482 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 ITGB7P26010 798 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 DNAJA1P31689 397 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 COPB1P53618 953 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 YWHAEP62258 255 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 CREMQ03060 361 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 UBXN1Q04323 297 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 YWHAHQ04917 246 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 COX10Q12887 443 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 LRMPQ12912 555 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 SMC1AQ14683 1233 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 KRT31Q15323 416 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 PTPN14Q15678 1187 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 EXOC3L4Q17RC7 722 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 MUM1Q2TAK8 710 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 CBWD6Q4V339 395 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 ALFQ53S48 1182 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 CBWD3Q5JTY5 395 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 PRSS36Q5K4E3 855 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 CBWD5Q5RIA9 395 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 C1orf220Q5T0J3 134 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 PLPP4Q5VZY2 271 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 AP1ARQ63HQ0 302 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 FDX2Q6P4F2 183 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 Q6ZS46 218 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 ANKS3Q6ZW76 656 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 TRIM74Q86UV6 250 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 TRIM73Q86UV7 250 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 TMEM173Q86WV6 379 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 IRF2BP1Q8IU81 584 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 OR6B3Q8NGW1 331 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 UHMK1Q8TAS1 419 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 SPPL3Q8TCT6 385 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 GDPD5Q8WTR4 605 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 RIN2Q8WYP3 895 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 FAM84AQ96KN4 292 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 FAM81BQ96LP2 452 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 FAM161BQ96MY7 647 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 TCF25Q9BQ70 676 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 PI4K2AQ9BTU6 479 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 TTPALQ9BTX7 342 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 EMILIN2Q9BXX0 1053 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 GPR62Q9BZJ7 368 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 SNX25Q9H3E2 840 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 PRDM12Q9H4Q4 367 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 CCSER2Q9H7U1 834 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 NGRNQ9NPE2 291 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 TRPV5Q9NQA5 729 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 ZNHIT6Q9NWK9 470 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 MKS1Q9NXB0 559 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 GCNT4Q9P109 453 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 SIX4Q9UIU6 781 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 SUFUQ9UMX1 484 aa6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 RRP15Q9Y3B9 282 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-208ENST00000436638 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 OR6C75A6NL08 312 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 PRSS47A8MTI9 375 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 LGALS16A8MUM7 142 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 PRRT4C9JH25 899 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 F8W810 466 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 H0Y3Z8 333 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 M0QZQ0 153 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 RFXAPO00287 272 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 GRM6O15303 877 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 KRT38O76015 456 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 VNN1O95497 513 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 LINC00271P0C7V0 271 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 CTSAP10619 480 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 ZNF18P17022 549 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 TBXAS1P24557 533 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 TKTP29401 623 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 LHX1P48742 406 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 AARSP49588 968 aaKnown RBP eCLIP6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 MFAP3P55082 362 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 ARPP19P56211 112 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 UBASH3AP57075 661 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 NOP14P78316 857 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 FANCCQ00597 558 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 TSPY1Q01534 308 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 DSG1Q02413 1049 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 KRT72Q14CN4 511 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 PSMD5Q16401 504 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 GRAMD1BQ3KR37 738 aa6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.53□□□□□ -1.36
ECHDC1-208ENST00000436638 CTXN3Q4LDR2 81 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms