RNA–Protein interactions for RNA: ENST00000436442.2

RPP21-223, Transcript of ribonuclease P/MRP subunit p21, human

TSL 1 (best) BASIC

Gene RPP21, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP21-223	ENST00000436442	SPACA3	Q8IXA5	215 aa		10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	TSC1	Q92574	1164 aa		10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	TTC9	Q92623	222 aa		10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	FGF11	Q92914	225 aa		10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	SLITRK1	Q96PX8	696 aa		10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	HNRNPAB	Q99729	332 aa	Known RBP	10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	TM9SF3	Q9HD45	589 aa		10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	THAP10	Q9P2Z0	257 aa	Predicted RBP	10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	NOL7	Q9UMY1	257 aa	Known RBP	10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	SLC27A6	Q9Y2P4	619 aa		10.51	□□□□□ -0.73
RPP21-223	ENST00000436442	MYO9A	B2RTY4	2548 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	C10orf142	B7Z368	130 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	NEDD8-MDP1	E9PL57	170 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	CBX4	O00257	560 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	FAM13A	O94988	1023 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	WISP1	O95388	367 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	C1S	P09871	688 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	ANXA13	P27216	316 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	YWHAQ	P27348	245 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	CYP27A1	Q02318	531 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	KCNC4	Q03721	635 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	POSTN	Q15063	836 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	SF3A1	Q15459	793 aa	Known RBP	10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	SHB	Q15464	509 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	MDH1B	Q5I0G3	518 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	HECTD3	Q5T447	861 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	C6orf118	Q5T5N4	469 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	PAQR9	Q6ZVX9	377 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	USP49	Q70CQ1	688 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	TMPRSS6	Q8IU80	811 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	NUP93	Q8N1F7	819 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	CACTIN-AS1	Q8N1I8	211 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	FAM181A	Q8N9Y4	354 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	PDZD8	Q8NEN9	1154 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	OR5B17	Q8NGF7	314 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	SCAMP5	Q8TAC9	235 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	CACTIN	Q8WUQ7	758 aa	Known RBP	10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	SNRNP27	Q8WVK2	155 aa	Known RBP	10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	SCFD1	Q8WVM8	642 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	POMGNT1	Q8WZA1	660 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	BAP1	Q92560	729 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	TMEM176A	Q96HP8	235 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	MRPL45	Q9BRJ2	306 aa	Known RBP	10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	FAM213A	Q9BRX8	229 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	NUP58	Q9BVL2	599 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	BBS2	Q9BXC9	721 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	KLF16	Q9BXK1	252 aa	Predicted RBP	10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	B3GNT5	Q9BYG0	378 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	ZNF518B	Q9C0D4	1074 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	MTMR12	Q9C0I1	747 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	PDE11A	Q9HCR9	933 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	WDR35	Q9P2L0	1181 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	SSUH2	Q9Y2M2	353 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	SH3BP1	Q9Y3L3	701 aa		10.5	□□□□□ -0.73
RPP21-223	ENST00000436442	USP9Y	O00507	2555 aa	Predicted RBP	10.49	□□□□□ -0.73
RPP21-223	ENST00000436442		A0A1B0GTQ1	180 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	SLC26A4	O43511	780 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	BRINP1	O60477	761 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	TSPAN3	O60637	253 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	TACC1	O75410	805 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	C6	P13671	934 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	JUP	P14923	745 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	PTPN1	P18031	435 aa	Known RBP	10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	ACSL1	P33121	698 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	HNF1B	P35680	557 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	DGKG	P49619	791 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	ACADVL	P49748	655 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	CCT8	P50990	548 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	CXADR	P78310	365 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	DNAJC3	Q13217	504 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	MCM6	Q14566	821 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	CCDC157	Q569K6	752 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	LAYN	Q6UX15	382 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442		Q6ZNB5	142 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	HVCN1	Q96D96	273 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	SAAL1	Q96ER3	474 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	SIPA1	Q96FS4	1042 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	HPDL	Q96IR7	371 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	XPO6	Q96QU8	1125 aa	Known RBP	10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	KCNK16	Q96T55	309 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	LLPH	Q9BRT6	129 aa	Known RBP	10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	DPEP3	Q9H4B8	488 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	INTS13	Q9NVM9	706 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	RBAK	Q9NYW8	714 aa	Predicted RBP	10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	FTSJ1	Q9UET6	329 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	TEP1	Q99973	2627 aa	Known RBP	10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	AHCTF1	Q8WYP5	2266 aa		10.49	□□□□□ -0.73
RPP21-223	ENST00000436442	VWA3A	A6NCI4	1184 aa		10.48	□□□□□ -0.73
RPP21-223	ENST00000436442	CLDN5	O00501	218 aa		10.48	□□□□□ -0.73
RPP21-223	ENST00000436442	ENC1	O14682	589 aa		10.48	□□□□□ -0.73
RPP21-223	ENST00000436442	NPC1	O15118	1278 aa		10.48	□□□□□ -0.73
RPP21-223	ENST00000436442	RTN3	O95197	1032 aa	Predicted RBP	10.48	□□□□□ -0.73
RPP21-223	ENST00000436442	TBX18	O95935	607 aa		10.48	□□□□□ -0.73
RPP21-223	ENST00000436442	PENK	P01210	267 aa	Predicted RBP	10.48	□□□□□ -0.73
RPP21-223	ENST00000436442	KRT19	P08727	400 aa		10.48	□□□□□ -0.73
RPP21-223	ENST00000436442	FAM163B	P0C2L3	166 aa		10.48	□□□□□ -0.73
RPP21-223	ENST00000436442	CDK4	P11802	303 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms