RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 TOP6BLQ8N6T0 577 aa16.3■□□□□ 0.2
RBFOX1-205ENST00000436368 C12orf29Q8N999 325 aa16.3■□□□□ 0.2
RBFOX1-205ENST00000436368 PCDH19Q8TAB3 1148 aa16.3■□□□□ 0.2
RBFOX1-205ENST00000436368 TCP10LQ8TDR4 215 aa16.3■□□□□ 0.2
RBFOX1-205ENST00000436368 CFAP36Q96G28 342 aa16.3■□□□□ 0.2
RBFOX1-205ENST00000436368 RMDN2Q96LZ7 410 aa16.3■□□□□ 0.2
RBFOX1-205ENST00000436368 NAT9Q9BTE0 207 aa16.3■□□□□ 0.2
RBFOX1-205ENST00000436368 FAM49AQ9H0Q0 323 aaPredicted RBP16.3■□□□□ 0.2
RBFOX1-205ENST00000436368 GTF2IRD1Q9UHL9 959 aa16.3■□□□□ 0.2
RBFOX1-205ENST00000436368 STAP1Q9ULZ2 295 aa16.3■□□□□ 0.2
RBFOX1-205ENST00000436368 TCRBV7S3A2A0A539 114 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 MBLAC1A4D2B0 266 aaPredicted RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 KPNA7A9QM74 516 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 BTBD19C9JJ37 291 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 KLF11O14901 512 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 XPO1O14980 1071 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 DAB1O75553 588 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 SMIM10L2AP0DMW4 78 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 SMIM10L2BP0DMW5 78 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 PRKCHP24723 683 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 RBL1P28749 1068 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 HOXA11P31270 313 aaPredicted RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 NEK3P51956 506 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 EFTUD2Q15029 972 aaKnown RBP eCLIP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 KBTBD12Q3ZCT8 623 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 PPP6R3Q5H9R7 873 aaPredicted RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 ATG16L1Q676U5 607 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 TRNP1Q6NT89 227 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 CYS1Q717R9 158 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 ASRGL1Q7L266 308 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 CTAGE3PQ8IX95 158 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 NME8Q8N427 588 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 GSDMBQ8TAX9 411 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 C10orf82Q8WW14 230 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 ERP27Q96DN0 273 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 TSSK1BQ9BXA7 367 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 DHX35Q9H5Z1 703 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 C10orf88Q9H8K7 445 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 EIF2B3Q9NR50 452 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 SETD4Q9NVD3 440 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 TUBGCP4Q9UGJ1 667 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 MTO1Q9Y2Z2 717 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 RAD54BQ9Y620 910 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 SBF1O95248 1867 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 PIRO00625 290 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 GPR32O75388 356 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 APOEP02649 317 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 APRTP07741 180 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 WARSP23381 471 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 IL4RP24394 825 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 ADRA1DP25100 572 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 CPT1AP50416 773 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 HDAC4P56524 1084 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 SF3A3Q12874 501 aaKnown RBP eCLIP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 WLSQ5T9L3 541 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 SH3PXD2AQ5TCZ1 1133 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 ALKAL1Q6UXT8 129 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 OTOAQ7RTW8 1153 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 CEP57Q86XR8 500 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 SCUBE3Q8IX30 993 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 TFB1MQ8WVM0 346 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 CDKL2Q92772 493 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 ANKRD27Q96NW4 1050 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 C11orf84Q9BUA3 381 aaPredicted RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 MYLK2Q9H1R3 596 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 ETNK1Q9HBU6 452 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 POPDC2Q9HBU9 364 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 ZFP69BQ9UJL9 534 aa16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 PIN4Q9Y237 131 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-205ENST00000436368 PLXNB2O15031 1838 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 ZNF236Q9UL36 1845 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 PIK3R2O00459 728 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 PPP1R12AO14974 1030 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 OPHN1O60890 802 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 FBXO21O94952 628 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 L1CAMP32004 1257 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 MATKP42679 507 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 PSMC4P43686 418 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 ZNF135P52742 658 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 GAD2Q05329 585 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 CDK18Q07002 472 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 SEMA5AQ13591 1074 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 MFSD10Q14728 455 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 SOWAHAQ2M3V2 549 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 NLRP9Q7RTR0 991 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 ADGRF2Q8IZF7 708 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 TAB3Q8N5C8 712 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 PPM1NQ8N819 430 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 C7orf31Q8N865 590 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 CFAP61Q8NHU2 1237 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 WDR83Q9BRX9 315 aaKnown RBP16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 SLC38A7Q9NVC3 462 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 GPATCH2LQ9NWQ4 482 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 NOP53Q9NZM5 478 aaKnown RBP16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 GINS2Q9Y248 185 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 TTLL3Q9Y4R7 772 aa16.28■□□□□ 0.2
RBFOX1-205ENST00000436368 DHRS4L1P0CG22 281 aa16.27■□□□□ 0.2
RBFOX1-205ENST00000436368 ADORA2BP29275 332 aa16.27■□□□□ 0.2
RBFOX1-205ENST00000436368 CCNFP41002 786 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms