RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MARCKSL1P49006 195 aa24■■□□□ 1.43
CPSF4-204ENST00000436336 RWDD2BP57060 319 aa24■■□□□ 1.43
CPSF4-204ENST00000436336 PITX1P78337 314 aaPredicted RBP24■■□□□ 1.43
CPSF4-204ENST00000436336 SNX30Q5VWJ9 437 aa24■■□□□ 1.43
CPSF4-204ENST00000436336 ELMOD1Q8N336 334 aa24■■□□□ 1.43
CPSF4-204ENST00000436336 ZNF512Q96ME7 567 aaPredicted RBP24■■□□□ 1.43
CPSF4-204ENST00000436336 CARD9Q9H257 536 aa24■■□□□ 1.43
CPSF4-204ENST00000436336 TLE6Q9H808 572 aa24■■□□□ 1.43
CPSF4-204ENST00000436336 RFXAPO00287 272 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 CES2O00748 559 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 PRPSAP2O60256 369 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 KRT7P08729 469 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 RDXP35241 583 aaKnown RBP23.99■■□□□ 1.43
CPSF4-204ENST00000436336 DEUP1Q05D60 604 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 DUSP6Q16828 381 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 RAB6CQ53S08 254 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 ELMSAN1Q6PJG2 1045 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 RBM23Q86U06 439 aaKnown RBP23.99■■□□□ 1.43
CPSF4-204ENST00000436336 DQX1Q8TE96 717 aaKnown RBP23.99■■□□□ 1.43
CPSF4-204ENST00000436336 ALG3Q92685 438 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 PBKQ96KB5 322 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 RAB6CQ9H0N0 254 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 OLA1Q9NTK5 396 aaKnown RBP23.99■■□□□ 1.43
CPSF4-204ENST00000436336 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.99■■□□□ 1.43
CPSF4-204ENST00000436336 CALCOCO1Q9P1Z2 691 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 HCFC2Q9Y5Z7 792 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 MYO9BQ13459 2157 aa23.99■■□□□ 1.43
CPSF4-204ENST00000436336 SRGAP2O75044 1071 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 TRUB2O95900 331 aaKnown RBP23.98■■□□□ 1.43
CPSF4-204ENST00000436336 F9P00740 461 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 RARGP13631 454 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 HOXA9P31269 272 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 CXCR5P32302 372 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 MSANTD2Q6P1R3 559 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 ZNF276Q8N554 614 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 SMOC2Q9H3U7 446 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 ZNF576Q9H609 170 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 FAM204AQ9H8W3 233 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 TRPM5Q9NZQ8 1165 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 PCSK1NQ9UHG2 260 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 CDC23Q9UJX2 597 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 LAMA3Q16787 3333 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 IGLV3-25P01717 112 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 IL1R2P27930 398 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 GBP1P32455 592 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 SCYL2Q6P3W7 929 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 RSRC2Q7L4I2 434 aaKnown RBP23.98■■□□□ 1.43
CPSF4-204ENST00000436336 TAC4Q86UU9 113 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 KATNAL2Q8IYT4 538 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 PPP2R3CQ969Q6 453 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 CDK5RAP1Q96SZ6 601 aaKnown RBP23.98■■□□□ 1.43
CPSF4-204ENST00000436336 CDCA3Q99618 268 aaPredicted RBP23.98■■□□□ 1.43
CPSF4-204ENST00000436336 TMEM51Q9NW97 253 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 DDIT4Q9NX09 232 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 DDX56Q9NY93 547 aaKnown RBP23.98■■□□□ 1.43
CPSF4-204ENST00000436336 MRFAP1Q9Y605 127 aa23.98■■□□□ 1.43
CPSF4-204ENST00000436336 TRANK1O15050 2925 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 ZNF840PA6NDX5 716 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 HNRNPA1P09651 372 aaKnown RBP eCLIP23.97■■□□□ 1.43
CPSF4-204ENST00000436336 GJC1P36383 396 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 ATXN1P54253 815 aaKnown RBP23.97■■□□□ 1.43
CPSF4-204ENST00000436336 NME3Q13232 169 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 DCAF12L1Q5VU92 463 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 TXNRD3NBQ6F5E7 133 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 ADAM32Q8TC27 787 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 COG1Q8WTW3 980 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 PEBP4Q96S96 227 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 ZWILCHQ9H900 591 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 PIGVQ9NUD9 493 aa23.97■■□□□ 1.43
CPSF4-204ENST00000436336 NRIP1P48552 1158 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 PABPC1LQ4VXU2 614 aaKnown RBP23.96■■□□□ 1.43
CPSF4-204ENST00000436336 BOLA3Q53S33 107 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 CYP4V2Q6ZWL3 525 aaPredicted RBP23.96■■□□□ 1.43
CPSF4-204ENST00000436336 SND1Q7KZF4 910 aaKnown RBP eCLIP23.96■■□□□ 1.43
CPSF4-204ENST00000436336 TADA2BQ86TJ2 420 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 CASP10Q92851 521 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 SERPINB11Q96P15 392 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 ZNF334Q9HCZ1 680 aaPredicted RBP23.96■■□□□ 1.43
CPSF4-204ENST00000436336 ZDHHC7Q9NXF8 308 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.96■■□□□ 1.43
CPSF4-204ENST00000436336 SYNJ2BP-COX16A0A087WUM0 186 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 CCL16O15467 120 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 TADA3O75528 432 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 EIF4EBP2Q13542 120 aaPredicted RBP23.96■■□□□ 1.43
CPSF4-204ENST00000436336 ATP13A4Q4VNC1 1196 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 EXD1Q8NHP7 514 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 TEKT4Q8WW24 435 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 LRRC3Q9BY71 257 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 L2HGDHQ9H9P8 463 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 IL21Q9HBE4 155 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 WDR6Q9NNW5 1121 aaKnown RBP23.96■■□□□ 1.43
CPSF4-204ENST00000436336 COX16Q9P0S2 106 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 NUDT5Q9UKK9 219 aa23.96■■□□□ 1.43
CPSF4-204ENST00000436336 COLQQ9Y215 455 aaPredicted RBP23.96■■□□□ 1.43
CPSF4-204ENST00000436336 TMEM265A0A087WTH1 108 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 ZNF185O15231 689 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 IRAK2O43187 625 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 TLR5O60602 858 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 RFPL2O75678 378 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 F11P03951 625 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms