RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 PPP2R3CQ969Q6 453 aa4.62□□□□□ -1.67
LINC00353-201ENST00000435401 ZC3H10Q96K80 434 aaKnown RBP4.62□□□□□ -1.67
LINC00353-201ENST00000435401 PPP1R9BQ96SB3 815 aa4.62□□□□□ -1.67
LINC00353-201ENST00000435401 THAP7Q9BT49 309 aaPredicted RBP4.62□□□□□ -1.67
LINC00353-201ENST00000435401 XPNPEP3Q9NQH7 507 aa4.62□□□□□ -1.67
LINC00353-201ENST00000435401 DNMT3BQ9UBC3 853 aaKnown RBP4.62□□□□□ -1.67
LINC00353-201ENST00000435401 NDRG4Q9ULP0 352 aaKnown RBP4.62□□□□□ -1.67
LINC00353-201ENST00000435401 FAM234BA2RU67 622 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 E5RJQ4 531 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 UBE2Q2LH0YL09 131 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 SOCS2O14508 198 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 AREL1O15033 823 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 RRP9O43818 475 aaKnown RBP4.61□□□□□ -1.67
LINC00353-201ENST00000435401 PLA2G6O60733 806 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 RASAL1O95294 804 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 FGBP02675 491 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 CYP2C9P11712 490 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 KCNA3P22001 575 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 GABRB3P28472 473 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 ADORA2AP29274 412 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 CCKBRP32239 447 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 CPT1AP50416 773 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 DGKEP52429 567 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 SATB1Q01826 763 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 TNFAIP2Q03169 654 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 RAPGEF1Q13905 1077 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 DHX8Q14562 1220 aaKnown RBP4.61□□□□□ -1.67
LINC00353-201ENST00000435401 STARD3Q14849 445 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 CACHD1Q5VU97 1274 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 RGS7BPQ6MZT1 257 aaPredicted RBP4.61□□□□□ -1.67
LINC00353-201ENST00000435401 CRTC1Q6UUV9 634 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 BEND5Q7L4P6 421 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 ZDHHC17Q8IUH5 632 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 YAF2Q8IY57 180 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 SAMD14Q8IZD0 417 aaPredicted RBP4.61□□□□□ -1.67
LINC00353-201ENST00000435401 SDR16C5Q8N3Y7 309 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 R3HDM4Q96D70 268 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 TMEM41AQ96HV5 264 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 SNX18Q96RF0 628 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 FAM118BQ9BPY3 351 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 GBA2Q9HCG7 927 aaPredicted RBP4.61□□□□□ -1.67
LINC00353-201ENST00000435401 ZSCAN32Q9NX65 697 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 DKK4Q9UBT3 224 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 SLC39A10Q9ULF5 831 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 GABRQQ9UN88 632 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 SHOC2Q9UQ13 582 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 AFG3L2Q9Y4W6 797 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 PAXBP1Q9Y5B6 917 aa4.61□□□□□ -1.67
LINC00353-201ENST00000435401 CLCA1A8K7I4 914 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 H3BNC9 293 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 PIP5K1CO60331 668 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 EXOC3O60645 756 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 EIF3JO75822 258 aaKnown RBP4.6□□□□□ -1.67
LINC00353-201ENST00000435401 USP1O94782 785 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 PRKCBP05771 671 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 CSF1RP07333 972 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 CYP2A6P11509 494 aaPredicted RBP4.6□□□□□ -1.67
LINC00353-201ENST00000435401 XRCC6P12956 609 aaKnown RBP eCLIP4.6□□□□□ -1.67
LINC00353-201ENST00000435401 TPH1P17752 444 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 ATP5F1P24539 256 aaPredicted RBP4.6□□□□□ -1.67
LINC00353-201ENST00000435401 PDIA3P30101 505 aaKnown RBP4.6□□□□□ -1.67
LINC00353-201ENST00000435401 LRPAP1P30533 357 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 CHKAP35790 457 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 GALNT1Q10472 559 aaPredicted RBP4.6□□□□□ -1.67
LINC00353-201ENST00000435401 TWIST1Q15672 202 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 ELF2Q15723 593 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 MGAT5BQ3V5L5 792 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 Q4G0T1 1027 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 ARHGAP15Q53QZ3 475 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 RAP1GAP2Q684P5 730 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 KIRREL2Q6UWL6 708 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 KIAA0408Q6ZU52 694 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 MYLK4Q86YV6 388 aaPredicted RBP4.6□□□□□ -1.67
LINC00353-201ENST00000435401 DNAJB14Q8TBM8 379 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 IPO4Q8TEX9 1081 aaKnown RBP4.6□□□□□ -1.67
LINC00353-201ENST00000435401 MUL1Q969V5 352 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 TRNAU1APQ9NX07 287 aaKnown RBP4.6□□□□□ -1.67
LINC00353-201ENST00000435401 TFCP2L1Q9NZI6 479 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 IGSF9Q9P2J2 1179 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 MAGED2Q9UNF1 606 aaPredicted RBP4.6□□□□□ -1.67
LINC00353-201ENST00000435401 CDY1Q9Y6F8 540 aa4.6□□□□□ -1.67
LINC00353-201ENST00000435401 AQP12BA6NM10 295 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 AGPSO00116 658 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 PODXLO00592 558 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 SRGAP2O75044 1071 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 PIAS2O75928 621 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 PDE8BO95263 885 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 TMEM191BP0C7N4 346 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 HGFP14210 728 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 ATICP31939 592 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 HALP42357 657 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 PDE6CP51160 858 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 PRKAG1P54619 331 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 PUM3Q15397 648 aaKnown RBP4.59□□□□□ -1.67
LINC00353-201ENST00000435401 LY6KQ17RY6 165 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 INSCQ1MX18 579 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 ZNF750Q32MQ0 723 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 L1TD1Q5T7N2 865 aaKnown RBP4.59□□□□□ -1.67
LINC00353-201ENST00000435401 ANO1Q5XXA6 986 aa4.59□□□□□ -1.67
LINC00353-201ENST00000435401 RUSC1-AS1Q66K80 236 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms