RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 FAM49BQ9NUQ9 324 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 HESX1Q9UBX0 185 aa16.69■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CXorf49A8MYA2 514 aaPredicted RBP16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TRIM49D1C9J1S8 452 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SNRPAP09012 282 aaKnown RBP16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TFE3P19532 575 aaPredicted RBP16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TPSB2P20231 275 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ADORA2AP29274 412 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ADCYAP1R1P41586 468 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SERPINB4P48594 390 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 OVGP1Q12889 678 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TPSAB1Q15661 275 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 FAXCQ5TGI0 409 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 FAM13CQ8NE31 585 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CCDC110Q8TBZ0 833 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 NSMCE1Q8WV22 266 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SKA1Q96BD8 255 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 B3GNT5Q9BYG0 378 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SMYD2Q9NRG4 433 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 MTMR10Q9NXD2 777 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SCN1AP35498 2009 aa16.68■□□□□ 0.26
HLA-DQB2-231ENST00000435145 KRT37O76014 449 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 NPTXRO95502 500 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 APOEP02649 317 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 APRTP07741 180 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 DLDP09622 509 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ZFXP17010 805 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 DESP17661 470 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 PTPN4P29074 926 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 NR2C2P49116 596 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SLC10A2Q12908 348 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ZNF449Q6P9G9 518 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ALKAL1Q6UXT8 129 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 PPM1NQ8N819 430 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 GPRC5AQ8NFJ5 357 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SIGLEC10Q96LC7 697 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 QKIQ96PU8 341 aaKnown RBP eCLIP16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SRPK1Q96SB4 655 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ALG13Q9NP73 1137 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TUBGCP4Q9UGJ1 667 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 DCTN4Q9UJW0 460 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 MTO1Q9Y2Z2 717 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 FAM159BA6NKW6 160 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 RFPL1O75677 317 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 METTL18O95568 372 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SNAI1O95863 264 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CYP2C8P10632 490 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 BGNP21810 368 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 GBE1Q04446 702 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TTLL12Q14166 644 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SOWAHAQ2M3V2 549 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 FAM182AQ5T1J6 154 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 FAM91A1Q658Y4 838 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 UNC5AQ6ZN44 842 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CDHR3Q6ZTQ4 885 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SH3TC2Q8TF17 1288 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 PTCD3Q96EY7 689 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SNTG2Q9NY99 539 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 PLLPQ9Y342 182 aa16.67■□□□□ 0.26
HLA-DQB2-231ENST00000435145 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 COPEO14579 308 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 PEX11AO75192 247 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ECM2O94769 699 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CCNA1P78396 465 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CDK16Q00536 496 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SNAPC2Q13487 334 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 WASHC2DQ5SRD0 308 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 LDLRAD1Q5T700 205 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SLC27A1Q6PCB7 646 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 APBB1IPQ7Z5R6 666 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 LONP2Q86WA8 852 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 VPS52Q8N1B4 723 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CRYBG2Q8N1P7 616 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ANKRD52Q8NB46 1076 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 BEST2Q8NFU1 509 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 EBNA1BP2Q99848 306 aaKnown RBP16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 RNPEPL1Q9HAU8 725 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 USP3Q9Y6I4 520 aa16.66■□□□□ 0.26
HLA-DQB2-231ENST00000435145 PLXNB2O15031 1838 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 MAP3K6O95382 1288 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 GM2AP17900 193 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 IBSPP21815 317 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 EPHB2P29323 1055 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 ARFIP2P53365 341 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 MRPS5P82675 430 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 BST2Q10589 180 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 SEMA5AQ13591 1074 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 PPP6R3Q5H9R7 873 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 LGSNQ5TDP6 509 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 C9orf57Q5W0N0 161 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CYS1Q717R9 158 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CTAGE3PQ8IX95 158 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 N4BP2L2Q92802 583 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TTC17Q96AE7 1141 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 C18orf25Q96B23 403 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 MTBPQ96DY7 904 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 CSPG4P5Q96PW8 444 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 TUBB6Q9BUF5 446 aa16.65■□□□□ 0.26
HLA-DQB2-231ENST00000435145 DPEP3Q9H4B8 488 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms