RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 UBA3Q8TBC4 463 aa18.78■□□□□ 0.6
CPNE1-213ENST00000434795 NDRG1Q92597 394 aaKnown RBP18.78■□□□□ 0.6
CPNE1-213ENST00000434795 P2RY11Q96G91 374 aa18.78■□□□□ 0.6
CPNE1-213ENST00000434795 CDK5RAP1Q96SZ6 601 aaKnown RBP18.78■□□□□ 0.6
CPNE1-213ENST00000434795 MARK1Q9P0L2 795 aa18.78■□□□□ 0.6
CPNE1-213ENST00000434795 LSM7Q9UK45 103 aaKnown RBP18.78■□□□□ 0.6
CPNE1-213ENST00000434795 TSPAN16Q9UKR8 245 aa18.78■□□□□ 0.6
CPNE1-213ENST00000434795 INVSQ9Y283 1065 aa18.78■□□□□ 0.6
CPNE1-213ENST00000434795 STARD13Q9Y3M8 1113 aa18.78■□□□□ 0.6
CPNE1-213ENST00000434795 BICDL2A1A5D9 508 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 XPO1O14980 1071 aaKnown RBP18.77■□□□□ 0.6
CPNE1-213ENST00000434795 P4HA2O15460 535 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 EPN2O95208 641 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 ZBED1O96006 694 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 CISD3P0C7P0 127 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 ZNF806P0C7X5 589 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 TBXAS1P24557 533 aaPredicted RBP18.77■□□□□ 0.6
CPNE1-213ENST00000434795 STX17P56962 302 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 SLC8A3P57103 927 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 COG7P83436 770 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 GOLGA7BQ2TAP0 167 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 CCDC40Q4G0X9 1142 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 PREPLQ4J6C6 727 aaPredicted RBP18.77■□□□□ 0.6
CPNE1-213ENST00000434795 PKDCCQ504Y2 493 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 USP39Q53GS9 565 aaKnown RBP18.77■□□□□ 0.6
CPNE1-213ENST00000434795 PRR23CQ6ZRP0 262 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 TPGS1Q6ZTW0 290 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 BHLHA9Q7RTU4 235 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 MIB1Q86YT6 1006 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 ARHGAP18Q8N392 663 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 TFAP2BQ92481 460 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 CNOT6LQ96LI5 555 aaKnown RBP18.77■□□□□ 0.6
CPNE1-213ENST00000434795 SRRTQ9BXP5 876 aaKnown RBP18.77■□□□□ 0.6
CPNE1-213ENST00000434795 ZDHHC4Q9NPG8 344 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 FBXO10Q9UK96 956 aa18.77■□□□□ 0.6
CPNE1-213ENST00000434795 MYH10P35580 1976 aa18.77■□□□□ 0.59
CPNE1-213ENST00000434795 O00370 1275 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 CACNG3O60359 315 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 GABBR2O75899 941 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 TYRP14679 529 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 CD19P15391 556 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 YWHAGP61981 247 aaKnown RBP eCLIP18.76■□□□□ 0.59
CPNE1-213ENST00000434795 EFEMP1Q12805 493 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 EOGTQ5NDL2 527 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 PLA2G2CQ5R387 149 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 ANO7Q6IWH7 933 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 LCLAT1Q6UWP7 414 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 NUDT18Q6ZVK8 323 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 TRIM59Q8IWR1 403 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 TERB1Q8NA31 727 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 OLIG1Q8TAK6 271 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 KAT5Q92993 513 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 ZSWIM1Q9BR11 485 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 BBS2Q9BXC9 721 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 ULBP1Q9BZM6 244 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 ZNF510Q9Y2H8 683 aa18.76■□□□□ 0.59
CPNE1-213ENST00000434795 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-213ENST00000434795 NEDD8-MDP1E9PL57 170 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 GDF9O60383 454 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 FOXD2O60548 495 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-213ENST00000434795 RHOBTB1O94844 696 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 GNA14O95837 355 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 PAEPP09466 180 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 BCAT1P54687 386 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 MARSP56192 900 aaKnown RBP18.75■□□□□ 0.59
CPNE1-213ENST00000434795 BST2Q10589 180 aaKnown RBP18.75■□□□□ 0.59
CPNE1-213ENST00000434795 KCNH2Q12809 1159 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 CCDC6Q16204 474 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 CNGA2Q16280 664 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 TMEM270Q6UE05 265 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 MDGA1Q8NFP4 955 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 SLC35F5Q8WV83 523 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 KCTD13Q8WZ19 329 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 NT5C1BQ96P26 610 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 XPO6Q96QU8 1125 aaKnown RBP18.75■□□□□ 0.59
CPNE1-213ENST00000434795 RTKNQ9BST9 563 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 TPSD1Q9BZJ3 242 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 DNAJC17Q9NVM6 304 aaKnown RBP18.75■□□□□ 0.59
CPNE1-213ENST00000434795 KIAA1468Q9P260 1216 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 HESX1Q9UBX0 185 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 CDV3Q9UKY7 258 aaKnown RBP18.75■□□□□ 0.59
CPNE1-213ENST00000434795 CTNND2Q9UQB3 1225 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 PCDHB4Q9Y5E5 795 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 PCDHGA5Q9Y5G8 931 aa18.75■□□□□ 0.59
CPNE1-213ENST00000434795 MED19A0JLT2 244 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-213ENST00000434795 DCDC2BA2VCK2 349 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 PRRT4C9JH25 899 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 ALDH1A2O94788 518 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 CETN1Q12798 172 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 SF3A2Q15428 464 aaKnown RBP18.74■□□□□ 0.59
CPNE1-213ENST00000434795 C10orf76Q5T2E6 689 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 GRAMD4Q6IC98 578 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 RRAGAQ7L523 313 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 NETO1Q8TDF5 533 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 DCLK3Q9C098 648 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 LRRC4Q9HBW1 653 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 POLMQ9NP87 494 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-213ENST00000434795 MARCH2Q9P0N8 246 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 RASAL2Q9UJF2 1139 aa18.74■□□□□ 0.59
CPNE1-213ENST00000434795 AGO1Q9UL18 857 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms