RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 USP13Q92995 863 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PPWD1Q96BP3 646 aaKnown RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 MSTO1Q9BUK6 570 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 HBS1LQ9Y450 684 aaKnown RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 NEMP1O14524 444 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 DCXO43602 365 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 AMHP03971 560 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 KRT3P12035 628 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PHKA2P46019 1235 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 RAP1GDS1P52306 607 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PSMC1P62191 440 aaKnown RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PDCD2Q16342 344 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 CMPK2Q5EBM0 449 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PPM1LQ5SGD2 360 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 SH2D4BQ5SQS7 431 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 DACT2Q5SW24 774 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 C15orf39Q6ZRI6 1047 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PDSS2Q86YH6 399 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PHF13Q86YI8 300 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 NKD2Q969F2 451 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 CPXM1Q96SM3 734 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 CISHQ9NSE2 258 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PLLPQ9Y342 182 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 SCINQ9Y6U3 715 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 STX16-NPEPL1H3BU86 382 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 STAM2O75886 525 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 GJB1P08034 283 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 ARSAP15289 507 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 RBL1P28749 1068 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 MIPP30301 263 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PKNOX1P55347 436 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 YWHAZP63104 245 aaKnown RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 FOXD4Q12950 439 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PRKG1Q13976 671 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 MYBPC3Q14896 1274 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 KRT72Q14CN4 511 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 EFHC1Q5JVL4 640 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 FRMD7Q6ZUT3 714 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 NET1Q7Z628 596 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 CRLF3Q8IUI8 442 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 CPNE9Q8IYJ1 553 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 ADGRF2Q8IZF7 708 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 ST13P4Q8IZP2 240 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 ARL10Q8N8L6 244 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 TMC2Q8TDI7 906 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 FBXL18Q96ME1 805 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 TMX2Q9Y320 296 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 CRABP2P29373 138 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 STIP1P31948 543 aaKnown RBP10.83□□□□□ -0.68
SCAF4-203ENST00000434667 SLC18A1P54219 525 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 CDH6P55285 790 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 SLC25A11Q02978 314 aaKnown RBP10.83□□□□□ -0.68
SCAF4-203ENST00000434667 FOLH1Q04609 750 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 FSTL1Q12841 308 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 C6orf52Q5T4I8 152 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 SNX31Q8N9S9 440 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 FAM172AQ8WUF8 416 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 VTI1AQ96AJ9 217 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 TRIM11Q96F44 468 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 CENPKQ9BS16 269 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 DNAAF2Q9NVR5 837 aaKnown RBP10.83□□□□□ -0.68
SCAF4-203ENST00000434667 WDR64B1ANS9 1081 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 AGRPO00253 132 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 XPO1O14980 1071 aaKnown RBP10.83□□□□□ -0.68
SCAF4-203ENST00000434667 ADCY3O60266 1144 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 PMLP29590 882 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 CHRNA5P30532 468 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 LSAMPQ13449 338 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 PGM5Q15124 567 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 FASTKD1Q53R41 847 aaKnown RBP10.83□□□□□ -0.68
SCAF4-203ENST00000434667 XAB2Q9HCS7 855 aaKnown RBP10.83□□□□□ -0.68
SCAF4-203ENST00000434667 TBC1D22BQ9NU19 505 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 DRG1Q9Y295 367 aaKnown RBP10.83□□□□□ -0.68
SCAF4-203ENST00000434667 MFHAS1Q9Y4C4 1052 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 TEX264Q9Y6I9 313 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 ZSWIM8A7E2V4 1837 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 C15orf38-AP3S2A0A0A6YYH1 394 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 AIM2O14862 343 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 SERPINB5P36952 375 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 ATXN1P54253 815 aaKnown RBP10.83□□□□□ -0.68
SCAF4-203ENST00000434667 MRPS22P82650 360 aaKnown RBP10.83□□□□□ -0.68
SCAF4-203ENST00000434667 STX3Q13277 289 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 TEX44Q53QW1 395 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 SLC27A3Q5K4L6 730 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 ARPINQ7Z6K5 226 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 ZNF398Q8TD17 642 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 PPP2R3CQ969Q6 453 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 PRPF18Q99633 342 aaKnown RBP10.83□□□□□ -0.68
SCAF4-203ENST00000434667 PSAT1Q9Y617 370 aa10.83□□□□□ -0.68
SCAF4-203ENST00000434667 FAM200BP0CF97 657 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 FUT4P22083 530 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 CAP2P40123 477 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 RGS7P49802 495 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 MAPK10P53779 464 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 C1QBPQ07021 282 aaKnown RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 TRMT5Q32P41 509 aaKnown RBP10.82□□□□□ -0.68
SCAF4-203ENST00000434667 ARHGEF16Q5VV41 709 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 MAP7D3Q8IWC1 876 aa10.82□□□□□ -0.68
SCAF4-203ENST00000434667 THNSL1Q8IYQ7 743 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms