RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 TMCO5BA8MYB1 307 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 LEFTY2O00292 366 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 IRF1P10914 325 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 NCAM1P13591 858 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 MMP8P22894 467 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 HNRNPH3P31942 346 aaKnown RBP22.41■■□□□ 1.18
TOP3B-205ENST00000434517 YWHAZP63104 245 aaKnown RBP22.41■■□□□ 1.18
TOP3B-205ENST00000434517 USP4Q13107 963 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 ACAD10Q6JQN1 1059 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 PPP1R2P3Q6NXS1 205 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 CC2D1AQ6P1N0 951 aaPredicted RBP22.41■■□□□ 1.18
TOP3B-205ENST00000434517 XYLT1Q86Y38 959 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 PIWIL1Q96J94 861 aaKnown RBP22.41■■□□□ 1.18
TOP3B-205ENST00000434517 POPDC2Q9HBU9 364 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 ADAM22Q9P0K1 906 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 MARCH2Q9P0N8 246 aa22.41■■□□□ 1.18
TOP3B-205ENST00000434517 GOLGA6L3A6NEY3 463 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 GOLGA8SH3BPF8 625 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 NARSO43776 548 aaKnown RBP22.4■■□□□ 1.18
TOP3B-205ENST00000434517 HSF2BPO75031 334 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 GRAP2O75791 330 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 CALB1P05937 261 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 GLI1P08151 1106 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 PLEKP08567 350 aaPredicted RBP22.4■■□□□ 1.18
TOP3B-205ENST00000434517 GDI1P31150 447 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 MTF1Q14872 753 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 TAF5Q15542 800 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 ZNF77Q15935 545 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 FAM102AQ5T9C2 384 aaPredicted RBP22.4■■□□□ 1.18
TOP3B-205ENST00000434517 PHF13Q86YI8 300 aaPredicted RBP22.4■■□□□ 1.18
TOP3B-205ENST00000434517 LRRC3BQ96PB8 259 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 BRD9Q9H8M2 597 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 GKN1Q9NS71 199 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 ASNSD1Q9NWL6 643 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 CFAP97Q9P2B7 532 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 DUSP12Q9UNI6 340 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 SH3BP1Q9Y3L3 701 aa22.4■■□□□ 1.18
TOP3B-205ENST00000434517 DDX3XO00571 662 aaKnown RBP eCLIP22.39■■□□□ 1.173e-9■■■□□ 17
TOP3B-205ENST00000434517 ZNF263O14978 683 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 SRFP11831 508 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 TCF3P15923 654 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 ZXDBP98169 803 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 FCHO2Q0JRZ9 810 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 ARID5BQ14865 1188 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 ARHGAP29Q52LW3 1261 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 SLC26A9Q7LBE3 791 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 UBALD2Q8IYN6 164 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 OLIG1Q8TAK6 271 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 RIN3Q8TB24 985 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 ZFRQ96KR1 1074 aaKnown RBP22.39■■□□□ 1.17
TOP3B-205ENST00000434517 KLF16Q9BXK1 252 aaPredicted RBP22.39■■□□□ 1.17
TOP3B-205ENST00000434517 SMOC2Q9H3U7 446 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 DEF6Q9H4E7 631 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 TAS2R14Q9NYV8 317 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 ARHGAP20Q9P2F6 1191 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 SFMBT1Q9UHJ3 866 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 NAALADL1Q9UQQ1 740 aa22.39■■□□□ 1.17
TOP3B-205ENST00000434517 SLC12A8A0AV02 714 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 DCXO43602 365 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 HMBSP08397 361 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 CDC25BP30305 580 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 RNASE9P60153 205 aaKnown RBP22.38■■□□□ 1.17
TOP3B-205ENST00000434517 GPC5P78333 572 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 COG7P83436 770 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 C1QBPQ07021 282 aaKnown RBP22.38■■□□□ 1.17
TOP3B-205ENST00000434517 MSANTD2Q6P1R3 559 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 WDR59Q6PJI9 974 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 BEND5Q7L4P6 421 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 PHLDB2Q86SQ0 1253 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 KCNH6Q9H252 994 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 WDR35Q9P2L0 1181 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 ADAMTS1Q9UHI8 967 aa22.38■■□□□ 1.17
TOP3B-205ENST00000434517 LSM7Q9UK45 103 aaKnown RBP22.38■■□□□ 1.17
TOP3B-205ENST00000434517 KIF26AQ9ULI4 1882 aaPredicted RBP22.38■■□□□ 1.17
TOP3B-205ENST00000434517 CHADO15335 359 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 DAB1O75553 588 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 FYNP06241 537 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 GZMAP12544 262 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 SCNN1AP37088 669 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 EIF4A3P38919 411 aaKnown RBP22.37■■□□□ 1.17
TOP3B-205ENST00000434517 IFNAR2P48551 515 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 PTP4A2Q12974 167 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 DCAF6Q58WW2 860 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 MON1BQ7L1V2 547 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 DEFB106AQ8N104 65 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 IRF7Q92985 503 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 ZFYVE19Q96K21 471 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 GRPEL1Q9HAV7 217 aa22.37■■□□□ 1.17
TOP3B-205ENST00000434517 TICRRQ7Z2Z1 1910 aa22.36■■□□□ 1.17
TOP3B-205ENST00000434517 SCAMP3O14828 347 aaKnown RBP22.36■■□□□ 1.17
TOP3B-205ENST00000434517 RTN2O75298 545 aa22.36■■□□□ 1.17
TOP3B-205ENST00000434517 PFKPQ01813 784 aa22.36■■□□□ 1.17
TOP3B-205ENST00000434517 SYPL2Q5VXT5 272 aa22.36■■□□□ 1.17
TOP3B-205ENST00000434517 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.36■■□□□ 1.17
TOP3B-205ENST00000434517 MCOLN2Q8IZK6 566 aa22.36■■□□□ 1.17
TOP3B-205ENST00000434517 TC2NQ8N9U0 490 aa22.36■■□□□ 1.17
TOP3B-205ENST00000434517 SPC24Q8NBT2 197 aa22.36■■□□□ 1.17
TOP3B-205ENST00000434517 DQX1Q8TE96 717 aaKnown RBP22.36■■□□□ 1.17
TOP3B-205ENST00000434517 SLC2A13Q96QE2 648 aa22.36■■□□□ 1.17
TOP3B-205ENST00000434517 SELENOOQ9BVL4 669 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms