RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 NEFHP12036 1026 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 CNTFP26441 200 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 L1CAMP32004 1257 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 EPHX2P34913 555 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 MAP2K2P36507 400 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 FDFT1P37268 417 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 HDAC4P56524 1084 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 CDK16Q00536 496 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 C9orf57Q5W0N0 161 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 ALKAL1Q6UXT8 129 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 CYS1Q717R9 158 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 ANKRD23Q86SG2 305 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 DPP9Q86TI2 863 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 HACE1Q8IYU2 909 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 KIF2BQ8N4N8 673 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 ZNF276Q8N554 614 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 ANKLE1Q8NAG6 615 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 RAB3IL1Q8TBN0 382 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 SERAC1Q96JX3 654 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 C11orf84Q9BUA3 381 aaPredicted RBP10.81□□□□□ -0.68
CD44-210ENST00000434472 TRIM6Q9C030 488 aaPredicted RBP10.81□□□□□ -0.68
CD44-210ENST00000434472 ABHD16BQ9H3Z7 469 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 EBF2Q9HAK2 575 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 POPDC2Q9HBU9 364 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 FAM49BQ9NUQ9 324 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.81□□□□□ -0.68
CD44-210ENST00000434472 NOP53Q9NZM5 478 aaKnown RBP10.81□□□□□ -0.68
CD44-210ENST00000434472 SLC17A7Q9P2U7 560 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 GTF2IRD1Q9UHL9 959 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 LNPEPQ9UIQ6 1025 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 MCM8Q9UJA3 840 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 STK38LQ9Y2H1 464 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 TRIM49D1C9J1S8 452 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 STK10O94804 968 aaKnown RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 MLNP12872 115 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 SMPD1P17405 629 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 HOXA11P31270 313 aaPredicted RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 GNL1P36915 607 aaPredicted RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 ARL4AP40617 200 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 CCNFP41002 786 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 ETV4P43268 484 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 GTF2A2P52657 109 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 ARFIP2P53365 341 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 IRF5Q13568 498 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 E2F5Q15329 346 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 DBN1Q16643 649 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 CA9Q16790 459 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 KIZQ2M2Z5 673 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 RAB6CQ53S08 254 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 PPP6R3Q5H9R7 873 aaPredicted RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 FBXO47Q5MNV8 452 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 ATG16L1Q676U5 607 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 SH2D5Q6ZV89 423 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 PAXIP1Q6ZW49 1069 aaPredicted RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 SCUBE3Q8IX30 993 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 CTAGE3PQ8IX95 158 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 PPM1NQ8N819 430 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 GSDMBQ8TAX9 411 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 SH3TC2Q8TF17 1288 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 NRCAMQ92823 1304 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 THOC1Q96FV9 657 aaKnown RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 TNIP3Q96KP6 325 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 ANKRD27Q96NW4 1050 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 EBNA1BP2Q99848 306 aaKnown RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 RAB6CQ9H0N0 254 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 DHX35Q9H5Z1 703 aaKnown RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 NPHS2Q9NP85 383 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 GDAP2Q9NXN4 497 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 TUBGCP4Q9UGJ1 667 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 AP4E1Q9UPM8 1137 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 PLXNB2O15031 1838 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 WDR91A4D1P6 747 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 GOLGA8RI6L899 631 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 PIRO00625 290 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 DNAJC6O75061 913 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 GPR32O75388 356 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 ATP5BP06576 529 aaKnown RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 APRTP07741 180 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 PYGBP11216 843 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 DARSP14868 501 aaKnown RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 KCNE1P15382 129 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 PTPN4P29074 926 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 MAGEA3P43357 314 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 TAF6P49848 677 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 SLC8A3P57103 927 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 CDK18Q07002 472 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 SEMA5AQ13591 1074 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 GRB14Q14449 540 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 PRKD1Q15139 912 aaPredicted RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 SOWAHAQ2M3V2 549 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 SV2CQ496J9 727 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 WASHC2DQ5SRD0 308 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 HEATR6Q6AI08 1181 aaKnown RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 CAND1Q86VP6 1230 aaKnown RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 CCNJLQ8IV13 435 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 C7orf31Q8N865 590 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 CFAP61Q8NHU2 1237 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 AGAP11Q8TF27 550 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 TBC1D31Q96DN5 1066 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms