RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 GBE1Q04446 702 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 POU5F1BQ06416 359 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 KHDC1Q4VXA5 237 aaKnown RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 TRIM68Q6AZZ1 485 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 TRMT10BQ6PF06 316 aaKnown RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 UNC5AQ6ZN44 842 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 C4orf50Q6ZRC1 276 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 GPC2Q8N158 579 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 MPP5Q8N3R9 675 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 ENDOVQ8N8Q3 282 aaKnown RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 FAM167BQ9BTA0 163 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 FRMD8Q9BZ67 464 aaPredicted RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 ZNF395Q9H8N7 513 aaPredicted RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 SUFUQ9UMX1 484 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 C2CD2Q9Y426 696 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 DNAH12Q6ZR08 3092 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 CCDC195A0A1B0GUA6 201 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 EIF4E1BA6NMX2 242 aaKnown RBP12.24□□□□□ -0.45
CD44-209ENST00000433892 DPYSL4O14531 572 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 TRDMT1O14717 391 aaKnown RBP12.24□□□□□ -0.45
CD44-209ENST00000433892 GSC2O15499 205 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 TSPAN1O60635 241 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 APOEP02649 317 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 CYP2F1P24903 491 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 GRIA1P42261 906 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 ARHGAP1Q07960 439 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 SLC10A2Q12908 348 aaPredicted RBP12.24□□□□□ -0.45
CD44-209ENST00000433892 PKDCCQ504Y2 493 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 MROH9Q5TGP6 573 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 CES4AQ5XG92 561 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 RINLQ6ZS11 566 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 APBB1IPQ7Z5R6 666 aaPredicted RBP12.24□□□□□ -0.45
CD44-209ENST00000433892 ALYREFQ86V81 257 aaKnown RBP12.24□□□□□ -0.45
CD44-209ENST00000433892 TEKT4Q8WW24 435 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 OXNAD1Q96HP4 312 aaPredicted RBP12.24□□□□□ -0.45
CD44-209ENST00000433892 NAF1Q96HR8 494 aaKnown RBP12.24□□□□□ -0.45
CD44-209ENST00000433892 LBHD1Q9BQE6 289 aaPredicted RBP12.24□□□□□ -0.45
CD44-209ENST00000433892 NMUR2Q9GZQ4 415 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 NRDE2Q9H7Z3 1164 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 BATF3Q9NR55 127 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 ZNF180Q9UJW8 692 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 NME7Q9Y5B8 376 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 NR2E3Q9Y5X4 410 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 CENPFP49454 3210 aa12.24□□□□□ -0.45
CD44-209ENST00000433892 F5H423 210 aaPredicted RBP12.23□□□□□ -0.45
CD44-209ENST00000433892 FCHO1O14526 889 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 ESRRAP11474 423 aaPredicted RBP12.23□□□□□ -0.45
CD44-209ENST00000433892 PTDSS1P48651 473 aaKnown RBP12.23□□□□□ -0.45
CD44-209ENST00000433892 TMPRSS15P98073 1019 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 BST1Q10588 318 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 LGSNQ5TDP6 509 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 ZNF534Q76KX8 674 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 TMEM110Q86TL2 294 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
CD44-209ENST00000433892 VPS52Q8N1B4 723 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 LINC01465Q8N7H1 131 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 C7orf31Q8N865 590 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 FBXO41Q8TF61 875 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 CLEC4CQ8WTT0 213 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 SLC35F5Q8WV83 523 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 TBCBQ99426 244 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 ZNF670Q9BS34 389 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 TUBB6Q9BUF5 446 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 SLC4A5Q9BY07 1137 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 DHX35Q9H5Z1 703 aaKnown RBP12.23□□□□□ -0.45
CD44-209ENST00000433892 RNF19AQ9NV58 838 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 TAS2R1Q9NYW7 299 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 LRRC42Q9Y546 428 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 E7ENQ6 273 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 I3L4J1 428 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 KLF11O14901 512 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 MDM4O15151 490 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 HCRTO43612 131 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 SKAP2O75563 359 aaPredicted RBP12.23□□□□□ -0.45
CD44-209ENST00000433892 TOP3BO95985 862 aaKnown RBP12.23□□□□□ -0.45
CD44-209ENST00000433892 KITP10721 976 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 MAGEA6P43360 314 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 SESN3P58005 492 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 CBLBQ13191 982 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 CHI3L2Q15782 390 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 SESTD1Q86VW0 696 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 MCUR1Q96AQ8 359 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 SIGLEC10Q96LC7 697 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 ZMAT2Q96NC0 199 aaKnown RBP12.23□□□□□ -0.45
CD44-209ENST00000433892 DCLRE1BQ9H816 532 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 PCMTD2Q9NV79 361 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 DONSONQ9NYP3 566 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 MARCOQ9UEW3 520 aaPredicted RBP12.23□□□□□ -0.45
CD44-209ENST00000433892 GINS2Q9Y248 185 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 TRIP11Q15643 1979 aa12.23□□□□□ -0.45
CD44-209ENST00000433892 HMX2A2RU54 273 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 KRT38O76015 456 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 STAU1O95793 577 aaKnown RBP12.22□□□□□ -0.45
CD44-209ENST00000433892 L1CAMP32004 1257 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 ABL2P42684 1182 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 CPA2P48052 419 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 IREB2P48200 963 aaKnown RBP12.22□□□□□ -0.45
CD44-209ENST00000433892 KPNB1Q14974 876 aaKnown RBP12.22□□□□□ -0.45
CD44-209ENST00000433892 KRT72Q14CN4 511 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms