RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 CCDC34Q96HJ3 373 aa22.96■■□□□ 1.27
RPUSD3-206ENST00000433535 SPACA7Q96KW9 195 aa22.96■■□□□ 1.27
RPUSD3-206ENST00000433535 LNP1A1A4G5 178 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 PATE3B3GLJ2 98 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 TPRP12270 2363 aaKnown RBP22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 TYRP14679 529 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 P2RY2P41231 377 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 RAD23BP54727 409 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 PREPLQ4J6C6 727 aaPredicted RBP22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 CBWD6Q4V339 395 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 CBWD3Q5JTY5 395 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 CBWD5Q5RIA9 395 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 TCERG1LQ5VWI1 586 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 EGFLAMQ63HQ2 1017 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 KLHDC10Q6PID8 442 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 TOGARAM2Q6ZUX3 1019 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 ARMCX6Q7L4S7 300 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 TATDN2Q93075 761 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 ERLEC1Q96DZ1 483 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 DNAI2Q9GZS0 605 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 RMND1Q9NWS8 449 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 MARK1Q9P0L2 795 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 MBD1Q9UIS9 605 aaPredicted RBP22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 TNRC6BQ9UPQ9 1833 aaKnown RBP22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 PLXND1Q9Y4D7 1925 aa22.95■■□□□ 1.26
RPUSD3-206ENST00000433535 STC2O76061 302 aa22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 HOXB2P14652 356 aa22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 PLA2G4AP47712 749 aa22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 PMS1P54277 932 aaKnown RBP22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 MAP7D1Q3KQU3 841 aa22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 Q6ZNB5 142 aa22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 TMEM176AQ96HP8 235 aa22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 XPO6Q96QU8 1125 aaKnown RBP22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 ACOX2Q99424 681 aa22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 RASAL2Q9UJF2 1139 aa22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 USP3Q9Y6I4 520 aa22.94■■□□□ 1.26
RPUSD3-206ENST00000433535 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 TRIM49BA6NDI0 452 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 STX10O60499 249 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 GABRG2P18507 467 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 PSEN1P49768 467 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 ZNF658Q5TYW1 1059 aaPredicted RBP22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 NUDT18Q6ZVK8 323 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 TRMT11Q7Z4G4 463 aaKnown RBP22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 PIGZQ86VD9 579 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 TMEFF1Q8IYR6 380 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 KCNV2Q8TDN2 545 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 PIGKQ92643 395 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 P2RY11Q96G91 374 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 TSG101Q99816 390 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 PLK2Q9NYY3 685 aa22.93■■□□□ 1.26
RPUSD3-206ENST00000433535 ACACBO00763 2458 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 ATXN2Q99700 1313 aaKnown RBP22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 C4orf47A7E2U8 309 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 PRRT4C9JH25 899 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 KHNYNO15037 678 aaKnown RBP22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 SLC16A3O15427 465 aaKnown RBP22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 MAP3K13O43283 966 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 HMBSP08397 361 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 RALAP11233 206 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 PTGER3P43115 390 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 EFEMP1Q12805 493 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 ANKRD40Q6AI12 368 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 LPCAT2Q7L5N7 544 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 TADA2BQ86TJ2 420 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 TTC39CQ8N584 583 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 FAXDC2Q96IV6 333 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 LSM14BQ9BX40 385 aaKnown RBP22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 CLIC5Q9NZA1 410 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 CALCOCO1Q9P1Z2 691 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 WDR35Q9P2L0 1181 aa22.92■■□□□ 1.26
RPUSD3-206ENST00000433535 GOLGA6L4A6NEF3 574 aa22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 KLKB1P03952 638 aa22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 NTSR1P30989 418 aa22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 DGKGP49619 791 aa22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 GOLGA7BQ2TAP0 167 aa22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 N4BP2L1Q5TBK1 243 aaPredicted RBP22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 ARHGAP17Q68EM7 881 aa22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 ZC3H3Q8IXZ2 948 aaKnown RBP22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 CHPFQ8IZ52 775 aa22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 GSDMAQ96QA5 445 aa22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 STARD13Q9Y3M8 1113 aa22.91■■□□□ 1.26
RPUSD3-206ENST00000433535 A0A1W2PQF6 199 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 TULP2O00295 520 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 IRX4P78413 519 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 CUL2Q13617 745 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 COBLL1Q53SF7 1204 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 RAB41Q5JT25 222 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 KIAA1211LQ6NV74 962 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 ZNF276Q8N554 614 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 ENGASEQ8NFI3 743 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 SMARCE1Q969G3 411 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 CDK5RAP1Q96SZ6 601 aaKnown RBP22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 RAD54BQ9Y620 910 aa22.9■■□□□ 1.26
RPUSD3-206ENST00000433535 KCNK5O95279 499 aa22.89■■□□□ 1.25
RPUSD3-206ENST00000433535 SMC2O95347 1197 aa22.89■■□□□ 1.25
RPUSD3-206ENST00000433535 CISD3P0C7P0 127 aa22.89■■□□□ 1.25
RPUSD3-206ENST00000433535 CORO1AP31146 461 aaKnown RBP22.89■■□□□ 1.25
RPUSD3-206ENST00000433535 TKTL1P51854 596 aa22.89■■□□□ 1.25
RPUSD3-206ENST00000433535 FKBP3Q00688 224 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms