RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 LRRC38Q5VT99 294 aa27.61■■■□□ 2.01
TMEM248-205ENST00000433271 PRPF38BQ5VTL8 546 aaKnown RBP27.61■■■□□ 2.01
TMEM248-205ENST00000433271 OTUD1Q5VV17 481 aaPredicted RBP27.61■■■□□ 2.01
TMEM248-205ENST00000433271 RSRC2Q7L4I2 434 aaKnown RBP27.61■■■□□ 2.01
TMEM248-205ENST00000433271 ZNF276Q8N554 614 aa27.61■■■□□ 2.01
TMEM248-205ENST00000433271 DQX1Q8TE96 717 aaKnown RBP27.61■■■□□ 2.01
TMEM248-205ENST00000433271 PCDHA3Q9Y5H8 950 aa27.61■■■□□ 2.01
TMEM248-205ENST00000433271 CCDC66A2RUB6 948 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 POU2F2P09086 479 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 MIPP30301 263 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 TAS2R40P59535 323 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 RHOT1Q8IXI2 618 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 UBL4BQ8N7F7 174 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 CDK5RAP1Q96SZ6 601 aaKnown RBP27.6■■■□□ 2.01
TMEM248-205ENST00000433271 LRRC3Q9BY71 257 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 PRDM12Q9H4Q4 367 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 IL21Q9HBE4 155 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 ZNF334Q9HCZ1 680 aaPredicted RBP27.6■■■□□ 2.01
TMEM248-205ENST00000433271 OLA1Q9NTK5 396 aaKnown RBP27.6■■■□□ 2.01
TMEM248-205ENST00000433271 CALCOCO1Q9P1Z2 691 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.6■■■□□ 2.01
TMEM248-205ENST00000433271 CDH23Q9H251 3354 aa27.6■■■□□ 2.01
TMEM248-205ENST00000433271 PSTPIP1O43586 416 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 XYLBO75191 536 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 TRUB2O95900 331 aaKnown RBP27.59■■■□□ 2.01
TMEM248-205ENST00000433271 F9P00740 461 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 F11P03951 625 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 RDXP35241 583 aaKnown RBP27.59■■■□□ 2.01
TMEM248-205ENST00000433271 HADHQ16836 314 aaKnown RBP27.59■■■□□ 2.01
TMEM248-205ENST00000433271 RAB6CQ53S08 254 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 MSANTD2Q6P1R3 559 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 TMC8Q8IU68 726 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 RAB6CQ9H0N0 254 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 SMOC2Q9H3U7 446 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 USP18Q9UMW8 372 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 SNX12Q9UMY4 172 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 DDX3YO15523 660 aaKnown RBP27.59■■■□□ 2.01
TMEM248-205ENST00000433271 IGLV3-25P01717 112 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 TCF4P15884 667 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 PRLRP16471 622 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 PEX5P50542 639 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 SLC25A11Q02978 314 aaKnown RBP27.59■■■□□ 2.01
TMEM248-205ENST00000433271 DEUP1Q05D60 604 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 POLNQ7Z5Q5 900 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 TMEM150AQ86TG1 271 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 VN1R2Q8NFZ6 395 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 ADAM32Q8TC27 787 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 KRT35Q92764 455 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 PRKD2Q9BZL6 878 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 FAM204AQ9H8W3 233 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 DDIT4Q9NX09 232 aa27.59■■■□□ 2.01
TMEM248-205ENST00000433271 SPDYE4A6NLX3 237 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 PRPSAP2O60256 369 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 TLR5O60602 858 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 TADA3O75528 432 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 GTF2F1P35269 517 aaKnown RBP eCLIP27.58■■■□□ 2.011e-7■■■■■ 30.9
TMEM248-205ENST00000433271 TUBP50607 506 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 RBM10P98175 930 aaKnown RBP27.58■■■□□ 2.01
TMEM248-205ENST00000433271 NME3Q13232 169 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 TCEAL5Q5H9L2 206 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 TADA2BQ86TJ2 420 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 TAC4Q86UU9 113 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 HS6ST3Q8IZP7 471 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 CASP10Q92851 521 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 CORO1BQ9BR76 489 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 RRAGDQ9NQL2 400 aaPredicted RBP27.58■■■□□ 2.01
TMEM248-205ENST00000433271 ASAH2Q9NR71 780 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 TMEM51Q9NW97 253 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 NUDT5Q9UKK9 219 aa27.58■■■□□ 2.01
TMEM248-205ENST00000433271 CCDC195A0A1B0GUA6 201 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 PAPLNO95428 1278 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 PTPN2P17706 415 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 GBP1P32455 592 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 MARCKSL1P49006 195 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 DNA2P51530 1060 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 EPHA5P54756 1037 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 HYAL1Q12794 435 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 EIF4EBP2Q13542 120 aaPredicted RBP27.57■■■□□ 2
TMEM248-205ENST00000433271 GRIN2CQ14957 1233 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 HECTD3Q5T447 861 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 SCYL2Q6P3W7 929 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 TMEM184AQ6ZMB5 413 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 IGFLR1Q9H665 355 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 CCSER2Q9H7U1 834 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 PIGVQ9NUD9 493 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 DZANK1Q9NVP4 752 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 PCSK1NQ9UHG2 260 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 SAR1BQ9Y6B6 198 aa27.57■■■□□ 2
TMEM248-205ENST00000433271 KRT7P08729 469 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 IL1R2P27930 398 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 ATXN1P54253 815 aaKnown RBP27.56■■■□□ 2
TMEM248-205ENST00000433271 AMPD2Q01433 879 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 C10orf120Q5SQS8 335 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 ZNF697Q5TEC3 545 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 KLHDC10Q6PID8 442 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 GAREM2Q75VX8 874 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 EFHBQ8N7U6 833 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 ALG3Q92685 438 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 SERPINB11Q96P15 392 aa27.56■■■□□ 2
TMEM248-205ENST00000433271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms