RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 TC2NQ8N9U0 490 aa19.27■□□□□ 0.68
RFTN1-202ENST00000431547 RIN3Q8TB24 985 aa19.27■□□□□ 0.68
RFTN1-202ENST00000431547 VCPIP1Q96JH7 1222 aa19.27■□□□□ 0.68
RFTN1-202ENST00000431547 SLC2A13Q96QE2 648 aa19.27■□□□□ 0.68
RFTN1-202ENST00000431547 C11orf70Q9BRQ4 267 aa19.27■□□□□ 0.68
RFTN1-202ENST00000431547 COL25A1Q9BXS0 654 aaPredicted RBP19.27■□□□□ 0.68
RFTN1-202ENST00000431547 MARCH2Q9P0N8 246 aa19.27■□□□□ 0.68
RFTN1-202ENST00000431547 DUSP12Q9UNI6 340 aa19.27■□□□□ 0.68
RFTN1-202ENST00000431547 NAALADL1Q9UQQ1 740 aa19.27■□□□□ 0.68
RFTN1-202ENST00000431547 DOCK8Q8NF50 2099 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 FAM170AA1A519 330 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 GOLGA6L3A6NEY3 463 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 CAPN9O14815 690 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 CHADO15335 359 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 RTN2O75298 545 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 SRFP11831 508 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 GSCP56915 257 aaPredicted RBP19.26■□□□□ 0.67
RFTN1-202ENST00000431547 GPC5P78333 572 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
RFTN1-202ENST00000431547 GRM2Q14416 872 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 MTF1Q14872 753 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 ARHGAP29Q52LW3 1261 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 SYPL2Q5VXT5 272 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 CC2D1AQ6P1N0 951 aaPredicted RBP19.26■□□□□ 0.67
RFTN1-202ENST00000431547 ARCQ7LC44 396 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.26■□□□□ 0.67
RFTN1-202ENST00000431547 MIB1Q86YT6 1006 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 MCOLN2Q8IZK6 566 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.26■□□□□ 0.67
RFTN1-202ENST00000431547 SLC2A4RGQ9NR83 387 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 TAS2R14Q9NYV8 317 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 CFAP97Q9P2B7 532 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 RASAL2Q9UJF2 1139 aa19.26■□□□□ 0.67
RFTN1-202ENST00000431547 A0A087X0T9 212 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 SSU72P8A0A1W2PR75 194 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 E2F8A0AVK6 867 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 ZNF263O14978 683 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 NARSO43776 548 aaKnown RBP19.25■□□□□ 0.67
RFTN1-202ENST00000431547 FTLP02792 175 aaPredicted RBP19.25■□□□□ 0.67
RFTN1-202ENST00000431547 FAM228BP0C875 321 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 GDI1P31150 447 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 EIF4A3P38919 411 aaKnown RBP19.25■□□□□ 0.67
RFTN1-202ENST00000431547 KPNA1P52294 538 aaPredicted RBP19.25■□□□□ 0.67
RFTN1-202ENST00000431547 FAM102AQ5T9C2 384 aaPredicted RBP19.25■□□□□ 0.67
RFTN1-202ENST00000431547 DEFB106AQ8N104 65 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 IRF7Q92985 503 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 ISCUQ9H1K1 167 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 SMOC2Q9H3U7 446 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 GRPEL1Q9HAV7 217 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 TRPV5Q9NQA5 729 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 IMPACTQ9P2X3 320 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 TMEM59LQ9UK28 342 aa19.25■□□□□ 0.67
RFTN1-202ENST00000431547 HBS1LQ9Y450 684 aaKnown RBP19.25■□□□□ 0.67
RFTN1-202ENST00000431547 MYH10P35580 1976 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 SLC12A8A0AV02 714 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 TMCO5BA8MYB1 307 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 GOLGA8SH3BPF8 625 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 DCXO43602 365 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 DAB1O75553 588 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 GRAP2O75791 330 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 NOS2P35228 1153 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 ZXDAP98168 799 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 PFKPQ01813 784 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 ASTE1Q2TB18 679 aaPredicted RBP19.24■□□□□ 0.67
RFTN1-202ENST00000431547 DCAF6Q58WW2 860 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 HTR3DQ70Z44 454 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 TTC16Q8NEE8 873 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 DQX1Q8TE96 717 aaKnown RBP19.24■□□□□ 0.67
RFTN1-202ENST00000431547 OSCP1Q8WVF1 389 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 CHP1Q99653 195 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 FAM83CQ9BQN1 747 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 BRD9Q9H8M2 597 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 SFMBT1Q9UHJ3 866 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 SH3BP1Q9Y3L3 701 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 ZNF638Q14966 1978 aaKnown RBP19.24■□□□□ 0.67
RFTN1-202ENST00000431547 OBSL1O75147 1896 aa19.24■□□□□ 0.67
RFTN1-202ENST00000431547 TNFRSF10AO00220 468 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 ARNTLO00327 626 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 SLC9A3R1O14745 358 aaPredicted RBP19.23■□□□□ 0.67
RFTN1-202ENST00000431547 GREM1O60565 184 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 STC2O76061 302 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 ALADP13716 330 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 MATKP42679 507 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 RNASE9P60153 205 aaKnown RBP19.23■□□□□ 0.67
RFTN1-202ENST00000431547 NNTQ13423 1086 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 PDGFRLQ15198 375 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 TRIP4Q15650 581 aaPredicted RBP19.23■□□□□ 0.67
RFTN1-202ENST00000431547 C3orf20Q8ND61 904 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 EDAQ92838 391 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 DNASE1L2Q92874 299 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 WBP2Q969T9 261 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 PLD4Q96BZ4 506 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 PANX2Q96RD6 677 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 NHEJ1Q9H9Q4 299 aaPredicted RBP19.23■□□□□ 0.67
RFTN1-202ENST00000431547 DUS2Q9NX74 493 aaKnown RBP19.23■□□□□ 0.67
RFTN1-202ENST00000431547 RRN3Q9NYV6 651 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.23■□□□□ 0.67
RFTN1-202ENST00000431547 TBC1D14Q9P2M4 693 aa19.23■□□□□ 0.67
RFTN1-202ENST00000431547 LSM7Q9UK45 103 aaKnown RBP19.23■□□□□ 0.67
RFTN1-202ENST00000431547 NENFQ9UMX5 172 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms