RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 STK33Q9BYT3 514 aa2.53□□□□□ -2
CDC40-204ENST00000431461 MYH16Q9H6N6 1097 aa2.53□□□□□ -2
CDC40-204ENST00000431461 ARHGEF3Q9NR81 526 aa2.53□□□□□ -2
CDC40-204ENST00000431461 RXFP3Q9NSD7 469 aa2.53□□□□□ -2
CDC40-204ENST00000431461 TFCP2L1Q9NZI6 479 aa2.53□□□□□ -2
CDC40-204ENST00000431461 SH3BP4Q9P0V3 963 aa2.53□□□□□ -2
CDC40-204ENST00000431461 DKK4Q9UBT3 224 aa2.53□□□□□ -2
CDC40-204ENST00000431461 NKX1-2Q9UD57 310 aaPredicted RBP2.53□□□□□ -2
CDC40-204ENST00000431461 STEAP1Q9UHE8 339 aa2.53□□□□□ -2
CDC40-204ENST00000431461 MID2Q9UJV3 735 aa2.53□□□□□ -2
CDC40-204ENST00000431461 PROCRQ9UNN8 238 aa2.53□□□□□ -2
CDC40-204ENST00000431461 AGAP1Q9UPQ3 857 aa2.53□□□□□ -2
CDC40-204ENST00000431461 FNDC1Q4ZHG4 1894 aaPredicted RBP2.52□□□□□ -2.01
CDC40-204ENST00000431461 SMIM35A0A1B0GVV1 85 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 ABHD14A-ACY1A0A1B0GW23 586 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 PLEKHD1A6NEE1 506 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 MYMKA6NI61 221 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 DCLK1O15075 740 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 CD3EAPO15446 510 aaKnown RBP2.52□□□□□ -2.01
CDC40-204ENST00000431461 FFAR2O15552 330 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 RRP9O43818 475 aaKnown RBP2.52□□□□□ -2.01
CDC40-204ENST00000431461 TMPRSS11DO60235 418 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 SRGAP2O75044 1071 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 USP12O75317 370 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 VIPP01282 170 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 RHOP08100 348 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 EBLN1P0CF75 366 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 MYCLP12524 364 aaPredicted RBP2.52□□□□□ -2.01
CDC40-204ENST00000431461 NDUFB7P17568 137 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 EGR1P18146 543 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 RBL1P28749 1068 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 MCM2P49736 904 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 PLCD1P51178 756 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 PGDP52209 483 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 LINC00205P59089 165 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 HTRA4P83105 476 aaPredicted RBP2.52□□□□□ -2.01
CDC40-204ENST00000431461 TIAL1Q01085 375 aaKnown RBP eCLIP2.52□□□□□ -2.01
CDC40-204ENST00000431461 HYAL1Q12794 435 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 BLMHQ13867 455 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 TWIST1Q15672 202 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 NPY5RQ15761 445 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 MAPKAPK3Q16644 382 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 SLC5A9Q2M3M2 681 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 TRIM71Q2Q1W2 868 aaKnown RBP2.52□□□□□ -2.01
CDC40-204ENST00000431461 AARS2Q5JTZ9 985 aaKnown RBP2.52□□□□□ -2.01
CDC40-204ENST00000431461 PXDC1Q5TGL8 231 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 PLAG1Q6DJT9 500 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 IZUMO1Q8IYV9 350 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 ABRAQ8N0Z2 381 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 SPICE1Q8N0Z3 855 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 SIRT6Q8N6T7 355 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 RNF152Q8N8N0 203 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 WDR60Q8WVS4 1066 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 SOCS4Q8WXH5 440 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 OVCA2Q8WZ82 227 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 RAPGEF4Q8WZA2 1011 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 PPP2R3CQ969Q6 453 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 MARK4Q96L34 752 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 DPCDQ9BVM2 203 aaPredicted RBP2.52□□□□□ -2.01
CDC40-204ENST00000431461 APOL5Q9BWW9 433 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 VN1R3Q9BXE9 311 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 CXorf36Q9H7Y0 433 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 MDFICQ9P1T7 246 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 DNMT3BQ9UBC3 853 aaKnown RBP2.52□□□□□ -2.01
CDC40-204ENST00000431461 DKK3Q9UBP4 350 aa2.52□□□□□ -2.01
CDC40-204ENST00000431461 MAGED2Q9UNF1 606 aaPredicted RBP2.52□□□□□ -2.01
CDC40-204ENST00000431461 OR2W5A6NFC9 320 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 RAB27BO00194 218 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 QSOX1O00391 747 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 IFRD1O00458 451 aaPredicted RBP2.51□□□□□ -2.01
CDC40-204ENST00000431461 PLA2G6O60733 806 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 MYL3P08590 195 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 NPSP0C0P6 89 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 IL1R1P14778 569 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 CHRM3P20309 590 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 MMP8P22894 467 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 PCSK6P29122 969 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 PPM1AP35813 382 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 LIPAP38571 399 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 HSPA7P48741 367 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 GATMP50440 423 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 TOB1P50616 345 aaPredicted RBP2.51□□□□□ -2.01
CDC40-204ENST00000431461 FOXO1Q12778 655 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 GPS1Q13098 491 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 STK3Q13188 491 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 CBFBQ13951 182 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 TBCCQ15814 346 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 SLC35G1Q2M3R5 365 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 GRAMD1BQ3KR37 738 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.51□□□□□ -2.01
CDC40-204ENST00000431461 FCRL6Q6DN72 434 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 HIBCHQ6NVY1 386 aaPredicted RBP2.51□□□□□ -2.01
CDC40-204ENST00000431461 MEPCEQ7L2J0 689 aaKnown RBP2.51□□□□□ -2.01
CDC40-204ENST00000431461 PARS2Q7L3T8 475 aaKnown RBP2.51□□□□□ -2.01
CDC40-204ENST00000431461 SLC29A4Q7RTT9 530 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 SFTPA1Q8IWL2 248 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 SMC5Q8IY18 1101 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 NRSN1Q8IZ57 195 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 CELF5Q8N6W0 485 aaKnown RBP2.51□□□□□ -2.01
CDC40-204ENST00000431461 ZNF527Q8NB42 609 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms