RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 LIMCH1Q9UPQ0 1083 aa8.35□□□□□ -1.07
ECHDC1-207ENST00000430841 HELZ2Q9BYK8 2649 aaKnown RBP8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 A0A1B0GTW7 788 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 FAM221BA6H8Z2 402 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 FLRT2O43155 660 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 SLC26A4O43511 780 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 PRPF6O94906 941 aaKnown RBP8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 ADRB2P07550 413 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 IRF1P10914 325 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 ACADMP11310 421 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 CD59P13987 128 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 GABRG2P18507 467 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 PLCG1P19174 1290 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 BDNFP23560 247 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 DDIT3P35638 169 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 HNF1BP35680 557 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 TXLNAP40222 546 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 PSMC1P62191 440 aaKnown RBP8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 SLC7A9P82251 487 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 POU5F1Q01860 360 aaKnown RBP8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 ARID5AQ03989 594 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 GRIK2Q13002 908 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 TEAD4Q15561 434 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 PEAR1Q5VY43 1037 aaPredicted RBP8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 CCNI2Q6ZMN8 369 aaPredicted RBP8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 TOGARAM2Q6ZUX3 1019 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 ZCCHC9Q8N567 271 aaKnown RBP8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 TOP6BLQ8N6T0 577 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 FRMD1Q8N878 549 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 NAT16Q8N8M0 369 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 RHBDD1Q8TEB9 315 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 FBXO32Q969P5 355 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 SPATA17Q96L03 361 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 AK8Q96MA6 479 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 MRPL44Q9H9J2 332 aaKnown RBP8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 PRDM16Q9HAZ2 1276 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 DNAJC17Q9NVM6 304 aaKnown RBP8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 GCNT4Q9P109 453 aa8.34□□□□□ -1.07
ECHDC1-207ENST00000430841 APC2O95996 2303 aa8.34□□□□□ -1.08
ECHDC1-207ENST00000430841 IGHV1OR15-9A0A0B4J2B8 117 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 E2F8A0AVK6 867 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 RRP8O43159 456 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 FAM189A1O60320 539 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 SYNCRIPO60506 623 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 RTN3O95197 1032 aaPredicted RBP8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 SLC6A11P48066 632 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 ATP1A2P50993 1020 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 TNNC1P63316 161 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 FAM193AP78312 1265 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 PLA2G4EQ3MJ16 856 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 LY6G5CQ5SRR4 150 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 HYIQ5T013 277 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 EMC10Q5UCC4 262 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 LYPD4Q6UWN0 246 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 STXBP4Q6ZWJ1 553 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 ADAT2Q7Z6V5 191 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 C4orf32Q8N8J7 132 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 TERB1Q8NA31 727 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 STK32AQ8WU08 396 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 UCMAQ8WVF2 138 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 NXPE2Q96DL1 559 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 ERLEC1Q96DZ1 483 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 ZSCAN31Q96LW9 406 aaPredicted RBP8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 ACCSQ96QU6 501 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 MED10Q9BTT4 135 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 ELOVL4Q9GZR5 314 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 GAREM1Q9H706 876 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 ASH1LQ9NR48 2969 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 ANAPC1Q9H1A4 1944 aa8.33□□□□□ -1.08
ECHDC1-207ENST00000430841 ZNF840PA6NDX5 716 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 CAPN8A6NHC0 703 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 NEDD8-MDP1E9PL57 170 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 F8VP50 259 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 TULP3O75386 442 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 GCNT3O95395 438 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 BMP15O95972 392 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 PROCP04070 461 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 PDGFRBP09619 1106 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 NCAM1P13591 858 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 HLA-EP13747 358 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 YWHAQP27348 245 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 CD6P30203 668 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 KIR2DL1P43626 348 aaPredicted RBP8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 NOP14P78316 857 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 GTF2BQ00403 316 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 CYP4F3Q08477 520 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 TAF10Q12962 218 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 ALCAMQ13740 583 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 SURF1Q15526 300 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 TMEM119Q4V9L6 283 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 MDH1BQ5I0G3 518 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 HECTD3Q5T447 861 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 ARL6IP4Q66PJ3 421 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 DPH6Q7L8W6 267 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 ZNF605Q86T29 641 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 BRSK2Q8IWQ3 736 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 ADGRG2Q8IZP9 1017 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 PIP4K2CQ8TBX8 421 aa8.32□□□□□ -1.08
ECHDC1-207ENST00000430841 IPO4Q8TEX9 1081 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms