RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 MAPK13O15264 365 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 FAM189A1O60320 539 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 ADRB2P07550 413 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 EPB41P11171 864 aaKnown RBP10.7□□□□□ -0.7
ATG4B-212ENST00000430617 CDK11BP21127 795 aaKnown RBP10.7□□□□□ -0.7
ATG4B-212ENST00000430617 DDX6P26196 483 aaKnown RBP eCLIP10.7□□□□□ -0.7
ATG4B-212ENST00000430617 TUFMP49411 452 aaKnown RBP10.7□□□□□ -0.7
ATG4B-212ENST00000430617 GPR15P49685 360 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 CLDN6P56747 220 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 ZXDBP98169 803 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 BNC1Q01954 994 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 SEMG2Q02383 582 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 LY6DQ14210 128 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 NR1I3Q14994 352 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 TAF12Q16514 161 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 SLC10A6Q3KNW5 377 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 CCDC40Q4G0X9 1142 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 SLC36A4Q6YBV0 504 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 DBX2Q6ZNG2 339 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 VSTM4Q8IW00 320 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 FAM186BQ8IYM0 893 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 RGL4Q8IZJ4 473 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 XXYLT1Q8NBI6 393 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 ZSWIM2Q8NEG5 633 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 ANKRD20A12PQ8NF67 263 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 RHBDD1Q8TEB9 315 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 SLC35C1Q96A29 364 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 BICD1Q96G01 975 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 ACO2Q99798 780 aaKnown RBP10.7□□□□□ -0.7
ATG4B-212ENST00000430617 SPTAN1Q13813 2472 aaKnown RBP10.7□□□□□ -0.7
ATG4B-212ENST00000430617 PLXNA2O75051 1894 aa10.7□□□□□ -0.7
ATG4B-212ENST00000430617 ITIH6Q6UXX5 1313 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 A0A0B4J269 797 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 ERVH48-1M5A8F1 160 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 PPEF2O14830 753 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 KIAA0391O15091 583 aaKnown RBP10.69□□□□□ -0.7
ATG4B-212ENST00000430617 TEX33O43247 280 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 EXOC3O60645 756 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 TOM1L1O75674 476 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 PSMC2P35998 433 aaKnown RBP10.69□□□□□ -0.7
ATG4B-212ENST00000430617 MTIF2P46199 727 aaKnown RBP10.69□□□□□ -0.7
ATG4B-212ENST00000430617 GUCY2FP51841 1108 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 CXADRP78310 365 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 MCL1Q07820 350 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 NR1H3Q13133 447 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 TAF1BQ53T94 588 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-212ENST00000430617 CCDC157Q569K6 752 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 COLEC12Q5KU26 742 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 EOGTQ5NDL2 527 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 SDHAF4Q5VUM1 108 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 CEP135Q66GS9 1140 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 DHRS13Q6UX07 377 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 DSTYKQ6XUX3 929 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 LRRTM3Q86VH5 581 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 C12orf40Q86WS4 652 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 CBWD2Q8IUF1 395 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 PLEKHO2Q8TD55 490 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 POMGNT1Q8WZA1 660 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 MRPS31Q92665 395 aaKnown RBP10.69□□□□□ -0.7
ATG4B-212ENST00000430617 ANP32BQ92688 251 aaKnown RBP10.69□□□□□ -0.7
ATG4B-212ENST00000430617 ERLEC1Q96DZ1 483 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 SAAL1Q96ER3 474 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 ZNF419Q96HQ0 510 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-212ENST00000430617 ARID3AQ99856 593 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 VPS16Q9H269 839 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 PCIF1Q9H4Z3 704 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 GAREM1Q9H706 876 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 METTL14Q9HCE5 456 aaKnown RBP10.69□□□□□ -0.7
ATG4B-212ENST00000430617 TM7SF3Q9NS93 570 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 ARMCX3Q9UH62 379 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-212ENST00000430617 MAGED2Q9UNF1 606 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-212ENST00000430617 CYP8B1Q9UNU6 501 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 AHCTF1Q8WYP5 2266 aa10.69□□□□□ -0.7
ATG4B-212ENST00000430617 A0A1W2PQC6 194 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 E9PAM4 449 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 RRP8O43159 456 aaKnown RBP10.68□□□□□ -0.7
ATG4B-212ENST00000430617 SLC28A2O43868 658 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 CILPO75339 1184 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 TPM3P06753 285 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 ZNF883P0CG24 379 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 HAPLN1P10915 354 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-212ENST00000430617 HARSP12081 509 aaKnown RBP10.68□□□□□ -0.7
ATG4B-212ENST00000430617 PRKCSHP14314 528 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-212ENST00000430617 TYMPP19971 482 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 LRPAP1P30533 357 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 TLE3Q04726 772 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 PPP2R3AQ06190 1150 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 ENPEPQ07075 957 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 NOLC1Q14978 699 aaKnown RBP eCLIP10.68□□□□□ -0.7
ATG4B-212ENST00000430617 SNRNP35Q16560 246 aaKnown RBP10.68□□□□□ -0.7
ATG4B-212ENST00000430617 PTPRNQ16849 979 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 FILIP1LQ4L180 1135 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 VWA3BQ502W6 1294 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 C1orf220Q5T0J3 134 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 SLFN12LQ6IEE8 588 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 MPZL3Q6UWV2 235 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 CRELD2Q6UXH1 353 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-212ENST00000430617 APBB1IPQ7Z5R6 666 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-212ENST00000430617 GPD1LQ8N335 351 aa10.68□□□□□ -0.7
ATG4B-212ENST00000430617 SH3RF2Q8TEC5 729 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms