RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 MDM4O15151 490 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 ADCY5O95622 1261 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 ABL1P00519 1130 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 LTFP02788 710 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 GLI1P08151 1106 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 GZMAP12544 262 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 TNFAIP3P21580 790 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 FECHP22830 423 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 GSCP56915 257 aaPredicted RBP13.01□□□□□ -0.33
USP40-205ENST00000430158 CDK17Q00537 523 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 SLC6A3Q01959 620 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 ACAD10Q6JQN1 1059 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 TRNP1Q6NT89 227 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 MMS22LQ6ZRQ5 1243 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 SLC26A9Q7LBE3 791 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 ERICH1Q86X53 443 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 MFSD6LQ8IWD5 586 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 ZNF687Q8N1G0 1237 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 CELF5Q8N6W0 485 aaKnown RBP13.01□□□□□ -0.33
USP40-205ENST00000430158 KIAA1958Q8N8K9 716 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 EDEM1Q92611 657 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 E2F7Q96AV8 911 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 NOX5Q96PH1 765 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 SMOC2Q9H3U7 446 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 ABHD10Q9NUJ1 306 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 TMEM59LQ9UK28 342 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 CEP83Q9Y592 693 aa13.01□□□□□ -0.33
USP40-205ENST00000430158 A0A087X0T9 212 aa13□□□□□ -0.33
USP40-205ENST00000430158 FAM170AA1A519 330 aa13□□□□□ -0.33
USP40-205ENST00000430158 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
USP40-205ENST00000430158 LEFTY2O00292 366 aa13□□□□□ -0.33
USP40-205ENST00000430158 SART1O43290 800 aaKnown RBP13□□□□□ -0.33
USP40-205ENST00000430158 IGLV3-25P01717 112 aa13□□□□□ -0.33
USP40-205ENST00000430158 FAM228BP0C875 321 aa13□□□□□ -0.33
USP40-205ENST00000430158 RALAP11233 206 aa13□□□□□ -0.33
USP40-205ENST00000430158 ATP5C1P36542 298 aaKnown RBP13□□□□□ -0.33
USP40-205ENST00000430158 AVPR1AP37288 418 aa13□□□□□ -0.33
USP40-205ENST00000430158 YWHAZP63104 245 aaKnown RBP13□□□□□ -0.33
USP40-205ENST00000430158 TDGQ13569 410 aa13□□□□□ -0.33
USP40-205ENST00000430158 SYPL2Q5VXT5 272 aa13□□□□□ -0.33
USP40-205ENST00000430158 DNAAF5Q86Y56 855 aa13□□□□□ -0.33
USP40-205ENST00000430158 ZDHHC17Q8IUH5 632 aa13□□□□□ -0.33
USP40-205ENST00000430158 MCOLN2Q8IZK6 566 aa13□□□□□ -0.33
USP40-205ENST00000430158 SH3RF2Q8TEC5 729 aa13□□□□□ -0.33
USP40-205ENST00000430158 NT5C3BQ969T7 300 aa13□□□□□ -0.33
USP40-205ENST00000430158 ASIC4Q96FT7 647 aa13□□□□□ -0.33
USP40-205ENST00000430158 CHP1Q99653 195 aa13□□□□□ -0.33
USP40-205ENST00000430158 FAM83CQ9BQN1 747 aa13□□□□□ -0.33
USP40-205ENST00000430158 COL25A1Q9BXS0 654 aaPredicted RBP13□□□□□ -0.33
USP40-205ENST00000430158 ADAM33Q9BZ11 813 aa13□□□□□ -0.33
USP40-205ENST00000430158 ISCUQ9H1K1 167 aa13□□□□□ -0.33
USP40-205ENST00000430158 PDCL3Q9H2J4 239 aa13□□□□□ -0.33
USP40-205ENST00000430158 KIF9Q9HAQ2 790 aa13□□□□□ -0.33
USP40-205ENST00000430158 GKN1Q9NS71 199 aa13□□□□□ -0.33
USP40-205ENST00000430158 ABCC13Q9NSE7 274 aa13□□□□□ -0.33
USP40-205ENST00000430158 NAALADL1Q9UQQ1 740 aa13□□□□□ -0.33
USP40-205ENST00000430158 CPQQ9Y646 472 aa13□□□□□ -0.33
USP40-205ENST00000430158 SSU72P8A0A1W2PR75 194 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 SHISA7A6NL88 538 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 NARSO43776 548 aaKnown RBP12.99□□□□□ -0.33
USP40-205ENST00000430158 CKMP06732 381 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 MBL2P11226 248 aaPredicted RBP12.99□□□□□ -0.33
USP40-205ENST00000430158 PSMC3P17980 439 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 EIF4A3P38919 411 aaKnown RBP12.99□□□□□ -0.33
USP40-205ENST00000430158 GPC5P78333 572 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 PITX1P78337 314 aaPredicted RBP12.99□□□□□ -0.33
USP40-205ENST00000430158 EFHC1Q5JVL4 640 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 C10orf120Q5SQS8 335 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 PPP1R15BQ5SWA1 713 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 OTUD1Q5VV17 481 aaPredicted RBP12.99□□□□□ -0.33
USP40-205ENST00000430158 BTBD8Q5XKL5 378 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 OR6B2Q6IFH4 312 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 ARCQ7LC44 396 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 BNIPLQ7Z465 357 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 BPIFB1Q8TDL5 484 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 IPO4Q8TEX9 1081 aaKnown RBP12.99□□□□□ -0.33
USP40-205ENST00000430158 DEPDC1BQ8WUY9 529 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 VCPIP1Q96JH7 1222 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 CDK5RAP1Q96SZ6 601 aaKnown RBP12.99□□□□□ -0.33
USP40-205ENST00000430158 C11orf70Q9BRQ4 267 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 POPDC2Q9HBU9 364 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 SLC2A4RGQ9NR83 387 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 SMPD4Q9NXE4 827 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 ADAM22Q9P0K1 906 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 ADAMTS1Q9UHI8 967 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 MUTYHQ9UIF7 546 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 DNMT3LQ9UJW3 386 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 TICRRQ7Z2Z1 1910 aa12.99□□□□□ -0.33
USP40-205ENST00000430158 MYO18AQ92614 2054 aaKnown RBP12.98□□□□□ -0.33
USP40-205ENST00000430158 HSF2BPO75031 334 aa12.98□□□□□ -0.33
USP40-205ENST00000430158 RTN2O75298 545 aa12.98□□□□□ -0.33
USP40-205ENST00000430158 DAB1O75553 588 aa12.98□□□□□ -0.33
USP40-205ENST00000430158 STC2O76061 302 aa12.98□□□□□ -0.33
USP40-205ENST00000430158 IGLV3-27P01718 113 aa12.98□□□□□ -0.33
USP40-205ENST00000430158 KLKB1P03952 638 aa12.98□□□□□ -0.33
USP40-205ENST00000430158 NSFP46459 744 aaKnown RBP12.98□□□□□ -0.33
USP40-205ENST00000430158 SNX16P57768 344 aa12.98□□□□□ -0.33
USP40-205ENST00000430158 EFEMP1Q12805 493 aa12.98□□□□□ -0.33
USP40-205ENST00000430158 GRM2Q14416 872 aa12.98□□□□□ -0.33
USP40-205ENST00000430158 TRIP4Q15650 581 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms