RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 NKD2Q969F2 451 aaPredicted RBP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 UNKQ9C0B0 810 aaKnown RBP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 KLHL4Q9C0H6 718 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 PLEKHA5Q9HAU0 1116 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 ERAP1Q9NZ08 941 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 DPPA5A6NC42 116 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 M0QYT0 321 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 KCNK1O00180 336 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 XPO1O14980 1071 aaKnown RBP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 RARBP10826 455 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 FDFT1P37268 417 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 IL31Q6EBC2 164 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 PTPRN2Q92932 1015 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 PPP2R3CQ969Q6 453 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 CLPTM1LQ96KA5 538 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 MRPL1Q9BYD6 325 aaKnown RBP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 RNF19AQ9NV58 838 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 ETNK2Q9NVF9 386 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 KLK14Q9P0G3 267 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 LACTBL1A8MY62 500 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 USP12O75317 370 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 LRCH4O75427 683 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 GRK2P25098 689 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 GNL1P36915 607 aaPredicted RBP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 MLH1P40692 756 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 PTP4A2Q12974 167 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 BLMHQ13867 455 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 TXNRD3NBQ6F5E7 133 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 RFWD3Q6PCD5 774 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 FBXO16Q8IX29 292 aaPredicted RBP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 CATSPER1Q8NEC5 780 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 APPL2Q8NEU8 664 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 ATP6V1E2Q96A05 226 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 SDCCAG3Q96C92 435 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 UBP1Q9NZI7 540 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 CDYLQ9Y232 598 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 ROBO1Q9Y6N7 1651 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 GAS2O43903 313 aaKnown RBP13.03□□□□□ -0.32
CPNE4-201ENST00000429747 SERPINE1P05121 402 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 TPBGLP0DKB5 382 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 NRLP54845 237 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 IL1RL1Q01638 556 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
CPNE4-201ENST00000429747 TTC7BQ86TV6 843 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 GDPD5Q8WTR4 605 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 ZNF516Q92618 1163 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 USP13Q92995 863 aaPredicted RBP13.03□□□□□ -0.32
CPNE4-201ENST00000429747 CD101Q93033 1021 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 ZNF560Q96MR9 790 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 ADAM7Q9H2U9 754 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 NKX1-2Q9UD57 310 aaPredicted RBP13.03□□□□□ -0.32
CPNE4-201ENST00000429747 BARX2Q9UMQ3 279 aaPredicted RBP13.03□□□□□ -0.32
CPNE4-201ENST00000429747 GJB1P08034 283 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 GDF10P55107 478 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 METTL7BQ6UX53 244 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 TIAM2Q8IVF5 1701 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 ZDHHC14Q8IZN3 488 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 NETO2Q8NC67 525 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 IPMKQ8NFU5 416 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 SLCO2A1Q92959 643 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 EPAS1Q99814 870 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 EBF2Q9HAK2 575 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 CYP3A43Q9HB55 503 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 XPNPEP1Q9NQW7 623 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 ARHGAP28Q9P2N2 729 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 PRR5-ARHGAP8B1AHC4 643 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 ACKR2O00590 384 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 AP1G2O75843 785 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 TRUB2O95900 331 aaKnown RBP13.03□□□□□ -0.32
CPNE4-201ENST00000429747 ARHGAP8P85298 464 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 KYAT1Q16773 422 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 IFNEQ86WN2 208 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 METTL23Q86XA0 190 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 RNF168Q8IYW5 571 aaPredicted RBP13.03□□□□□ -0.32
CPNE4-201ENST00000429747 PIWIL2Q8TC59 973 aaKnown RBP13.03□□□□□ -0.32
CPNE4-201ENST00000429747 RNF157Q96PX1 679 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 CPXM1Q96SM3 734 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 HAUS8Q9BT25 410 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 CADM1Q9BY67 442 aaKnown RBP13.03□□□□□ -0.32
CPNE4-201ENST00000429747 DRC3Q9H069 523 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 AAASQ9NRG9 546 aa13.03□□□□□ -0.32
CPNE4-201ENST00000429747 CYB561D2O14569 222 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 USP1O94782 785 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 NFICP08651 508 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 C6orf222P0C671 652 aaPredicted RBP13.02□□□□□ -0.32
CPNE4-201ENST00000429747 MCF2P10911 925 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 RAG1P15918 1043 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 UBA1P22314 1058 aaKnown RBP13.02□□□□□ -0.32
CPNE4-201ENST00000429747 PHEXP78562 749 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 MGAT5Q09328 741 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 CLEC4DQ8WXI8 215 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 USP6NLQ92738 828 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 ELMO2Q96JJ3 720 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 CCDC138Q96M89 665 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 PHACTR1Q9C0D0 580 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 RABGEF1Q9UJ41 708 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 CHADO15335 359 aa13.02□□□□□ -0.32
CPNE4-201ENST00000429747 MAGEB2O15479 319 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms