RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	DCAF17	Q5H9S7	520 aa	Predicted RBP	18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	TCERG1L	Q5VWI1	586 aa		18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	ARHGAP17	Q68EM7	881 aa		18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	HTR3D	Q70Z44	454 aa		18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	CCDC186	Q7Z3E2	898 aa		18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	SFTPA1	Q8IWL2	248 aa		18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	ZNF276	Q8N554	614 aa		18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	JAKMIP2	Q96AA8	810 aa		18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	PNKP	Q96T60	521 aa		18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	MAN1B1	Q9UKM7	699 aa		18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	ZZEF1	O43149	2961 aa		18.68	■□□□□ 0.58
MRPL28-203	ENST00000429738	PI4KA	P42356	2102 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738		A0A1W2PQH9	124 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	CDX4	O14627	284 aa	Predicted RBP	18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	KAT7	O95251	611 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	CD44	P16070	742 aa	Known RBP	18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	ATP5C1	P36542	298 aa	Known RBP	18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	MRPS21	P82921	87 aa	Known RBP	18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	C2orf27A	Q580R0	203 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	SCD5	Q86SK9	330 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	RASSF3	Q86WH2	238 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	CNOT6L	Q96LI5	555 aa	Known RBP	18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	HEXIM2	Q96MH2	286 aa	Known RBP	18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	TPSD1	Q9BZJ3	242 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	UBXN6	Q9BZV1	441 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	NACA2	Q9H009	215 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	SPHK2	Q9NRA0	654 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	ARMCX3	Q9UH62	379 aa	Predicted RBP	18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	MMP17	Q9ULZ9	603 aa		18.67	■□□□□ 0.58
MRPL28-203	ENST00000429738	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	PSMA7	O14818	248 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	PMM2	O15305	246 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	APOD	P05090	189 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	IRF1	P10914	325 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	RARG	P13631	454 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	BMP6	P22004	513 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	PPP1R2	P41236	205 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	GRIA2	P42262	883 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	KIR2DL1	P43626	348 aa	Predicted RBP	18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	PSEN1	P49768	467 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	SEC13	P55735	322 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	IRX4	P78413	519 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	RAB41	Q5JT25	222 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	ANO7	Q6IWH7	933 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	FOXR2	Q6PJQ5	311 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	CYP2U1	Q7Z449	544 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	UBR7	Q8N806	425 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	CEP63	Q96MT8	703 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	ADAM33	Q9BZ11	813 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	METTL14	Q9HCE5	456 aa	Known RBP	18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	CACNA1E	Q15878	2313 aa		18.66	■□□□□ 0.58
MRPL28-203	ENST00000429738	TMEM8B	A6NDV4	472 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	PATE3	B3GLJ2	98 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	SPINK2	P20155	84 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	BCKDHB	P21953	392 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	TNFRSF4	P43489	277 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	STIM1	Q13586	685 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	CUL2	Q13617	745 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	CRY1	Q16526	586 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	HSF5	Q4G112	596 aa	Predicted RBP	18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	ISM2	Q6H9L7	571 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	TTI2	Q6NXR4	508 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	TMEM25	Q86YD3	366 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	IL17RC	Q8NAC3	791 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	ANKRD52	Q8NB46	1076 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	ARHGEF4	Q9NR80	690 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	CLIC5	Q9NZA1	410 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	ASPM	Q8IZT6	3477 aa		18.65	■□□□□ 0.58
MRPL28-203	ENST00000429738	PPP1R3G	B7ZBB8	358 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	GADD45B	O75293	160 aa	Predicted RBP	18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	TULP3	O75386	442 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	TOP3B	O95985	862 aa	Known RBP	18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	FMO5	P49326	533 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	DHPS	P49366	369 aa	Predicted RBP	18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	UAP1L1	Q3KQV9	507 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	TMEM92	Q6UXU6	159 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738		Q6ZNB5	142 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	PIGZ	Q86VD9	579 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	TTC30A	Q86WT1	665 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	CCDC33	Q8N5R6	958 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	OLIG1	Q8TAK6	271 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	PIGK	Q92643	395 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	SCNM1	Q9BWG6	230 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	MARK1	Q9P0L2	795 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	EVL	Q9UI08	416 aa	Predicted RBP	18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	DNMT3L	Q9UJW3	386 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	NAGPA	Q9UK23	515 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	NUDT5	Q9UKK9	219 aa		18.64	■□□□□ 0.57
MRPL28-203	ENST00000429738	PKD1L2	Q7Z442	2459 aa		18.63	■□□□□ 0.57
MRPL28-203	ENST00000429738	FASN	P49327	2511 aa	Known RBP	18.63	■□□□□ 0.57
MRPL28-203	ENST00000429738	MDM4	O15151	490 aa		18.63	■□□□□ 0.57
MRPL28-203	ENST00000429738	ALDH1A2	O94788	518 aa		18.63	■□□□□ 0.57
MRPL28-203	ENST00000429738	TIE1	P35590	1138 aa		18.63	■□□□□ 0.57
MRPL28-203	ENST00000429738	PLA2G4A	P47712	749 aa		18.63	■□□□□ 0.57
MRPL28-203	ENST00000429738	KDSR	Q06136	332 aa		18.63	■□□□□ 0.57
MRPL28-203	ENST00000429738	GOLGA8F	Q08AF8	430 aa		18.63	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms