RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 ATAD5Q96QE3 1844 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 NCF2P19878 526 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 RAB4BP61018 213 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 GRSF1Q12849 480 aaKnown RBP eCLIP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 ZMAT5Q9UDW3 170 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 NCAM2O15394 837 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 TMBIM6P55061 237 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 MCOLN3Q8TDD5 553 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 APOL2Q9BQE5 337 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 LBHD1Q9BQE6 289 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 KMT5AQ9NQR1 393 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 DCTN4Q9UJW0 460 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 CABIN1Q9Y6J0 2220 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 SF3B1O75533 1304 aaKnown RBP eCLIP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 VPS4BO75351 444 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 WDPCPO95876 746 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 PMLP29590 882 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 NUDT1P36639 197 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 ANTXR2P58335 489 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 BNIP2Q12982 314 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 TBC1D25Q3MII6 688 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 ULK2Q8IYT8 1036 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 RTL3Q8N8U3 475 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 FAM13CQ8NE31 585 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 STARD8Q92502 1023 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 SMARCAD1Q9H4L7 1026 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 PLEKP08567 350 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 KCNMA1Q12791 1236 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 SPARTQ8N0X7 666 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 ATP6V0D2Q8N8Y2 350 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 HELQQ8TDG4 1101 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 PIGBQ92521 554 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 RNF34Q969K3 372 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 ZFYVE19Q96K21 471 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 SMYD3Q9H7B4 428 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 VTA1Q9NP79 307 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 DCP1AQ9NPI6 582 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 A6NJR5 290 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 TEX28O15482 410 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 CYP27B1O15528 508 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 FGFR3P22607 806 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 MEI1Q5TIA1 1274 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 DNAJC24Q6P3W2 148 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 RHOT1Q8IXI2 618 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 MICU2Q8IYU8 434 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 TMEM47Q9BQJ4 181 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 MND1Q9BWT6 205 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 DENND2DQ9H6A0 471 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 GGT7Q9UJ14 662 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 SNX9Q9Y5X1 595 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 MFN2O95140 757 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 HOXB8P17481 243 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 NMT1P30419 496 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 MAPK6Q16659 721 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 RBBP8Q99708 897 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 POLD4Q9HCU8 107 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 NPHS2Q9NP85 383 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 GRID1Q9ULK0 1009 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 RGPD1P0DJD0 1748 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 SALL1Q9NSC2 1324 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 ZBTB5O15062 677 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 H6PDO95479 791 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 C8BP07358 591 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 KITP10721 976 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 CD44P16070 742 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 PTPN2P17706 415 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 SLC29A2Q14542 456 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 WDR45BQ5MNZ6 344 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 FAM91A1Q658Y4 838 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 TCEAL3Q969E4 200 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 PURBQ96QR8 312 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 TMEM245Q9H330 911 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 DDX18Q9NVP1 670 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 LMCD1Q9NZU5 365 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 AXIN2Q9Y2T1 843 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 USP17L5A8MUK1 530 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 GOLGA8SH3BPF8 625 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 CLPXO76031 633 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 YES1P07947 543 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 GPS1Q13098 491 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 DARS2Q6PI48 645 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 TTC17Q96AE7 1141 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 PLA2G12BQ9BX93 195 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 PACSIN1Q9BY11 444 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 SHCBP1LQ9BZQ2 653 aa7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 XPO7Q9UIA9 1087 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-202ENST00000429713 NUP188Q5SRE5 1749 aa7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 ENO2P09104 434 aaPredicted RBP7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 MVKQ03426 396 aa7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 DSTYKQ6XUX3 929 aa7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 ZBTB49Q6ZSB9 765 aa7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 METTL13Q8N6R0 699 aa7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 FBXL13Q8NEE6 735 aa7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 FLCNQ8NFG4 579 aa7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 DACT3Q96B18 629 aaPredicted RBP7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 FAM111AQ96PZ2 611 aa7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 C17orf80Q9BSJ5 609 aa7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 A0A0G2JPF8 293 aa7.74□□□□□ -1.17
SYNPO2-202ENST00000429713 HNRNPCL3B7ZW38 293 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms