RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 GPATCH1Q9BRR8 931 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 MRGBPQ9NV56 204 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 NCKIPSDQ9NZQ3 722 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 EPS15L1Q9UBC2 864 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 ARHGAP26Q9UNA1 814 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 NIP7Q9Y221 180 aaKnown RBP eCLIP5.33□□□□□ -1.56
RIF1-203ENST00000428287 ABCA7Q8IZY2 2146 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 CLIC2O15247 247 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 HARS2P49590 506 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 NDUFA5Q16718 116 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 ZBED5Q49AG3 693 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 RNF207Q6ZRF8 634 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 LYSMD3Q7Z3D4 306 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 DDHD1Q8NEL9 900 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 ACDQ96AP0 544 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 IKZF4Q9H2S9 585 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TMEM165Q9HC07 324 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 KCNQ5Q9NR82 932 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 DNAJC17Q9NVM6 304 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 SCHIP1Q9P0W5 487 aaPredicted RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 GNEQ9Y223 722 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 DYTNA2CJ06 578 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 BOLA2-SMG1P6H3BVE0 249 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 PDE5AO76074 875 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 PDGFRBP09619 1106 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 C7P10643 843 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 CTBSQ01459 385 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 NFX1Q12986 1120 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 IKBKEQ14164 716 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 INSCQ1MX18 579 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.32□□□□□ -1.56
RIF1-203ENST00000428287 WDR78Q5VTH9 848 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 ITIH5Q86UX2 942 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 CRLF3Q8IUI8 442 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 STARD8Q92502 1023 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TMEM8AQ9HCN3 771 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 AP4B1Q9Y6B7 739 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 FAM86B1E9PN63 330 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 SPECC1L-ADORA2AF8WAN1 911 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 ACOT8O14734 319 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 LYPLA2O95372 231 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 BPGMP07738 259 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 LDHCP07864 332 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 FAM86B2P0C5J1 330 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 CYP4A11Q02928 519 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 CYB5RLQ6IPT4 315 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 SLC26A11Q86WA9 606 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 ADGRF4Q8IZF3 695 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 GOLM1Q8NBJ4 401 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 LSM14AQ8ND56 463 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 TOP1MTQ969P6 601 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 SRPK1Q96SB4 655 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 UBE2TQ9NPD8 197 aaPredicted RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 A0A0G2JMZ2 1700 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 LRRC37A2A6NM11 1700 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 SPTBN2O15020 2390 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 DYNC1LI2O43237 492 aaPredicted RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 BCAS2O75934 225 aaPredicted RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 TMEM63AO94886 807 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 BMP10O95393 424 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 GOLGA8HP0CJ92 632 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 GRK2P25098 689 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 DCKP27707 260 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 BCAP31P51572 246 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 PRPF39Q86UA1 669 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 FBXW8Q8N3Y1 598 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TMEM102Q8N9M5 508 aaPredicted RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 SEMA4DQ92854 862 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 DYNLL2Q96FJ2 89 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 PLEKHA8Q96JA3 519 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 FAM111AQ96PZ2 611 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 NAT9Q9BTE0 207 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 SLC13A1Q9BZW2 595 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 NYXQ9GZU5 481 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TRPC7Q9HCX4 862 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 CD320Q9NPF0 282 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 QPCTLQ9NXS2 382 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 UTP6Q9NYH9 597 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 SERPINB13Q9UIV8 391 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 IQANK1A0A1B0GTG1 560 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TRIM43BA6NCK2 446 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 FAM47E-STBD1D6RA91 191 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 MEIS1O00470 390 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 CRTAMO95727 393 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 NMT1P30419 496 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 MYL7Q01449 175 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 RHDQ02161 417 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 KDSRQ06136 332 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 LRRC8BQ6P9F7 803 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 ALYREFQ86V81 257 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 TXNRD3Q86VQ6 643 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 FBXL13Q8NEE6 735 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 EIF2AK1Q9BQI3 630 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 TMEM117Q9H0C3 514 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 INTS2Q9H0H0 1204 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 SYNPO2Q9UMS6 1093 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 C7orf72A4D263 438 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TMEM191CA6NGB0 347 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 KRT37O76014 449 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 SNRPAP09012 282 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms