RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 TRIP4Q15650 581 aaPredicted RBP9.59□□□□□ -0.87
SMC1A-203ENST00000428014 TSR1Q2NL82 804 aaKnown RBP9.59□□□□□ -0.87
SMC1A-203ENST00000428014 ZNF394Q53GI3 561 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 MPP7Q5T2T1 576 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 RNF43Q68DV7 783 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 DPY19L2P1Q6NXN4 242 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 ARCQ7LC44 396 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 SCD5Q86SK9 330 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 ZNF677Q86XU0 584 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 ZDHHC17Q8IUH5 632 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 ETFBKMTQ8IXQ9 262 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 FAM71AQ8IYT1 594 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 MAML2Q8IZL2 1156 aaPredicted RBP9.59□□□□□ -0.87
SMC1A-203ENST00000428014 RIN3Q8TB24 985 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 ZNF606Q8WXB4 792 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 CD101Q93033 1021 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 CHFRQ96EP1 664 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 SLC4A5Q9BY07 1137 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 SLC2A11Q9BYW1 496 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 FOXQ1Q9C009 403 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 MIS12Q9H081 205 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 EBF3Q9H4W6 596 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 LMAN1LQ9HAT1 526 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 CHORDC1Q9UHD1 332 aaPredicted RBP9.59□□□□□ -0.87
SMC1A-203ENST00000428014 FBXO10Q9UK96 956 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 SH3BP1Q9Y3L3 701 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 STARD13Q9Y3M8 1113 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 PCDHB4Q9Y5E5 795 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 IRAK2O43187 625 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 CACNG3O60359 315 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 FOXD2O60548 495 aaPredicted RBP9.58□□□□□ -0.88
SMC1A-203ENST00000428014 CYP17A1P05093 508 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 SP9P0CG40 484 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 RARGP13631 454 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 CD19P15391 556 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 GRIA2P42262 883 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 CXCL12P48061 93 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 DAOAP59103 153 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 YWHAGP61981 247 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMC1A-203ENST00000428014 PTK2Q05397 1052 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 DHCR24Q15392 516 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 GOLGA7BQ2TAP0 167 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 GAB4Q2WGN9 574 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 TXNDC11Q6PKC3 985 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 SYT13Q7L8C5 426 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 BHLHA9Q7RTU4 235 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 GPRIN1Q7Z2K8 1008 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 TRMT11Q7Z4G4 463 aaKnown RBP9.58□□□□□ -0.88
SMC1A-203ENST00000428014 SIX6OS1Q8N1H7 587 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 GPR161Q8N6U8 529 aaKnown RBP9.58□□□□□ -0.88
SMC1A-203ENST00000428014 C1orf131Q8NDD1 294 aaKnown RBP9.58□□□□□ -0.88
SMC1A-203ENST00000428014 TFAP2BQ92481 460 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 NOX5Q96PH1 765 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 ERGIC2Q96RQ1 377 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 NAA15Q9BXJ9 866 aaKnown RBP9.58□□□□□ -0.88
SMC1A-203ENST00000428014 STK33Q9BYT3 514 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 NACA2Q9H009 215 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 CCSER2Q9H7U1 834 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 SIX2Q9NPC8 291 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 UBE2TQ9NPD8 197 aaPredicted RBP9.58□□□□□ -0.88
SMC1A-203ENST00000428014 SPHK2Q9NRA0 654 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 RRN3Q9NYV6 651 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 CFAP97Q9P2B7 532 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 EBF1Q9UH73 591 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 LIMA1Q9UHB6 759 aaKnown RBP9.58□□□□□ -0.88
SMC1A-203ENST00000428014 NAGPAQ9UK23 515 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 MYO6Q9UM54 1294 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 SLC27A6Q9Y2P4 619 aa9.58□□□□□ -0.88
SMC1A-203ENST00000428014 MTF2Q9Y483 593 aaPredicted RBP9.58□□□□□ -0.88
SMC1A-203ENST00000428014 EP300Q09472 2414 aaPredicted RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 A0A1W2PQH9 124 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 OTOL1A6NHN0 477 aaPredicted RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 BECN2A8MW95 431 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 RNF225M0QZC1 329 aaPredicted RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 GFRA2O00451 464 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 CYP26A1O43174 497 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 LRP3O75074 770 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 LSM8O95777 96 aaKnown RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 PENKP01210 267 aaPredicted RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 IGLV3-27P01718 113 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 DCNP07585 359 aaKnown RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 UCHL3P15374 230 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 SLC9A1P19634 815 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 GNA15P30679 374 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 OPRD1P41143 372 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 TNK2Q07912 1038 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 MTAPQ13126 283 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 SKOR2Q2VWA4 1001 aaPredicted RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 C6orf132Q5T0Z8 1188 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 FKBP15Q5T1M5 1219 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 KLHDC7AQ5VTJ3 777 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 BSPRYQ5W0U4 402 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 NUGGCQ68CJ6 796 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 PPP1R2P3Q6NXS1 205 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 PMF1Q6P1K2 205 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 RHBDF2Q6PJF5 856 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 C11orf74Q86VG3 221 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 ARHGEF19Q8IW93 802 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 UNC45BQ8IWX7 931 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 PHTF2Q8N3S3 785 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms