RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 EXOC3L4Q17RC7 722 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 DPCR1Q3MIW9 517 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 PM20D1Q6GTS8 502 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 CCDC33Q8N5R6 958 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 KCTD13Q8WZ19 329 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 NDRG1Q92597 394 aaKnown RBP21.66■■□□□ 1.06
HSPG2-205ENST00000427897 HHIPQ96QV1 700 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 CNGB3Q9NQW8 809 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.66■■□□□ 1.06
HSPG2-205ENST00000427897 ATG2BQ96BY7 2078 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 PIK3R2O00459 728 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 STC2O76061 302 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 TIE1P35590 1138 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 TNFRSF4P43489 277 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 GAB4Q2WGN9 574 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.65■■□□□ 1.06
HSPG2-205ENST00000427897 C12orf40Q86WS4 652 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 KIAA2013Q8IYS2 634 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 DCLK2Q8N568 766 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 EZH1Q92800 747 aaPredicted RBP21.65■■□□□ 1.06
HSPG2-205ENST00000427897 KREMEN1Q96MU8 473 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 ST7Q9NRC1 585 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 ABCC13Q9NSE7 274 aa21.65■■□□□ 1.06
HSPG2-205ENST00000427897 DNAJC17Q9NVM6 304 aaKnown RBP21.65■■□□□ 1.06
HSPG2-205ENST00000427897 THAP12O43422 761 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 HRO43593 1189 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 TULP3O75386 442 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 LETM1O95202 739 aaPredicted RBP21.64■■□□□ 1.05
HSPG2-205ENST00000427897 APBB3O95704 486 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 CALCAP01258 141 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 CYBBP04839 570 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 TYRP14679 529 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 SLC9A1P19634 815 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 CORO1AP31146 461 aaKnown RBP21.64■■□□□ 1.05
HSPG2-205ENST00000427897 CHKAP35790 457 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 DGKEP52429 567 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 SRSF5Q13243 272 aaKnown RBP21.64■■□□□ 1.05
HSPG2-205ENST00000427897 MAN2A1Q16706 1144 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 HSP90AA4PQ58FG1 418 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 BSPRYQ5W0U4 402 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 GRAMD4Q6IC98 578 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 TRIM65Q6PJ69 517 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 GPR161Q8N6U8 529 aaKnown RBP21.64■■□□□ 1.05
HSPG2-205ENST00000427897 USP33Q8TEY7 942 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 SLC35F5Q8WV83 523 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 EDEM1Q92611 657 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 BHMTQ93088 406 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 MIS12Q9H081 205 aa21.64■■□□□ 1.05
HSPG2-205ENST00000427897 POLR3BQ9NW08 1133 aaPredicted RBP21.64■■□□□ 1.05
HSPG2-205ENST00000427897 CCDC163A0A0D9SF12 145 aa21.63■■□□□ 1.05
HSPG2-205ENST00000427897 AXIN1O15169 862 aa21.63■■□□□ 1.05
HSPG2-205ENST00000427897 ALDH1A2O94788 518 aa21.63■■□□□ 1.05
HSPG2-205ENST00000427897 HARS2P49590 506 aaKnown RBP21.63■■□□□ 1.05
HSPG2-205ENST00000427897 CT47A1Q5JQC4 288 aaPredicted RBP21.63■■□□□ 1.05
HSPG2-205ENST00000427897 EOGTQ5NDL2 527 aa21.63■■□□□ 1.05
HSPG2-205ENST00000427897 LAIR1Q6GTX8 287 aa21.63■■□□□ 1.05
HSPG2-205ENST00000427897 TSTD1Q8NFU3 115 aa21.63■■□□□ 1.05
HSPG2-205ENST00000427897 HSFY1Q96LI6 401 aa21.63■■□□□ 1.05
HSPG2-205ENST00000427897 MED15Q96RN5 788 aa21.63■■□□□ 1.05
HSPG2-205ENST00000427897 APEX2Q9UBZ4 518 aa21.63■■□□□ 1.05
HSPG2-205ENST00000427897 ZFHX2Q9C0A1 2572 aaPredicted RBP21.63■■□□□ 1.05
HSPG2-205ENST00000427897 MYOFQ9NZM1 2061 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 GTPBP10A4D1E9 387 aaKnown RBP21.62■■□□□ 1.05
HSPG2-205ENST00000427897 RPP40O75818 363 aaKnown RBP21.62■■□□□ 1.05
HSPG2-205ENST00000427897 KLF8O95600 359 aaPredicted RBP21.62■■□□□ 1.05
HSPG2-205ENST00000427897 TPM2P07951 284 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 GNA15P30679 374 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 VWA3BQ502W6 1294 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 PKDCCQ504Y2 493 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 C10orf76Q5T2E6 689 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 SDE2Q6IQ49 451 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 PMF1Q6P1K2 205 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 GJB7Q6PEY0 223 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 SASS6Q6UVJ0 657 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 TRMT11Q7Z4G4 463 aaKnown RBP21.62■■□□□ 1.05
HSPG2-205ENST00000427897 IRF2BP1Q8IU81 584 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 DENND1CQ8IV53 801 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 FMNL3Q8IVF7 1028 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 IRGQQ8WZA9 623 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 PLD4Q96BZ4 506 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 TUBGCP2Q9BSJ2 902 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 POLMQ9NP87 494 aaPredicted RBP21.62■■□□□ 1.05
HSPG2-205ENST00000427897 SFMBT1Q9UHJ3 866 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 MMP17Q9ULZ9 603 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 USP34Q70CQ2 3546 aa21.62■■□□□ 1.05
HSPG2-205ENST00000427897 YJEFN3A6XGL0 299 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 E7ENQ6 273 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 ZBTB24O43167 697 aaPredicted RBP21.61■■□□□ 1.05
HSPG2-205ENST00000427897 FBXO21O94952 628 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 HOXC13P31276 330 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 ACADSBP45954 432 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 ZNF132P52740 706 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 DAOAP59103 153 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 HSF5Q4G112 596 aaPredicted RBP21.61■■□□□ 1.05
HSPG2-205ENST00000427897 EMC10Q5UCC4 262 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 ALLCQ8N6M5 410 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 TXNDC5Q8NBS9 432 aaKnown RBP21.61■■□□□ 1.05
HSPG2-205ENST00000427897 GAB3Q8WWW8 586 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 NDST4Q9H3R1 872 aa21.61■■□□□ 1.05
HSPG2-205ENST00000427897 PLK2Q9NYY3 685 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms