RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 OR4Q2P0C623 313 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 KRT10P13645 584 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 NOS2P35228 1153 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 ARSEP51690 589 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 ADCY2Q08462 1091 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 SLC25A52Q3SY17 297 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 MAP9Q49MG5 647 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 SLC39A12Q504Y0 691 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 BOLA3Q53S33 107 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 ODF2Q5BJF6 829 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 PM20D1Q6GTS8 502 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 CCDC137Q6PK04 289 aaKnown RBP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 STRADAQ7RTN6 431 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 BHLHA9Q7RTU4 235 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 BNIPLQ7Z465 357 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 TMEM173Q86WV6 379 aaPredicted RBP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 CMTR2Q8IYT2 770 aaKnown RBP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 DEFB106AQ8N104 65 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 EIF1ADQ8N9N8 165 aaKnown RBP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 BCL7CQ8WUZ0 217 aaPredicted RBP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 CASKIN2Q8WXE0 1202 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 SLCO2A1Q92959 643 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 FAM149B1Q96BN6 582 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 FUBP3Q96I24 572 aaKnown RBP eCLIP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 TBCBQ99426 244 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 DCLK3Q9C098 648 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 R3HDM2Q9Y2K5 976 aaKnown RBP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 OR6C75A6NL08 312 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 NT5C1B-RDH14C9J2C7 533 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 TBC1D4O60343 1298 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 TJP3O95049 919 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 ZBED1O96006 694 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 PBX3P40426 434 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 CCNG2Q16589 344 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 NFE2Q16621 373 aaPredicted RBP18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 CTXN3Q4LDR2 81 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 ZNF280DQ6N043 979 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 HFE2Q6ZVN8 426 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 JAMLQ86YT9 394 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 AENQ8WTP8 325 aaKnown RBP18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 C1orf54Q8WWF1 131 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 IRGQQ8WZA9 623 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 NECAB3Q96P71 396 aaPredicted RBP18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 NPY6RQ99463 290 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 POPDC2Q9HBU9 364 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 CHST7Q9NS84 486 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 MRPL42Q9Y6G3 142 aaKnown RBP18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 USP3Q9Y6I4 520 aa18.72■□□□□ 0.59
AC055811.2-201ENST00000427497 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.71■□□□□ 0.59
AC055811.2-201ENST00000427497 ESYT3A0FGR9 886 aa18.71■□□□□ 0.59
AC055811.2-201ENST00000427497 YJEFN3A6XGL0 299 aa18.71■□□□□ 0.59
AC055811.2-201ENST00000427497 E7ENQ6 273 aa18.71■□□□□ 0.59
AC055811.2-201ENST00000427497 FYNP06241 537 aa18.71■□□□□ 0.59
AC055811.2-201ENST00000427497 CARSP49589 748 aaKnown RBP18.71■□□□□ 0.59
AC055811.2-201ENST00000427497 OTUD1Q5VV17 481 aaPredicted RBP18.71■□□□□ 0.59
AC055811.2-201ENST00000427497 CEP57Q86XR8 500 aa18.71■□□□□ 0.59
AC055811.2-201ENST00000427497 HSPH1Q92598 858 aa18.71■□□□□ 0.59
AC055811.2-201ENST00000427497 UBE2ZQ9H832 354 aaPredicted RBP18.71■□□□□ 0.59
AC055811.2-201ENST00000427497 TNFRSF10BO14763 440 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 MDM4O15151 490 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 ATP8B1O43520 1251 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 CD48P09326 243 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 USP17L7P0C7H9 530 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 CYP2F1P24903 491 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 TRADDQ15628 312 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 DCAF6Q58WW2 860 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 GSPT2Q8IYD1 628 aaKnown RBP18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 KCTD6Q8NC69 237 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 FAM71BQ8TC56 605 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 ATG4AQ8WYN0 398 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 B3GALT6Q96L58 329 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 ERP44Q9BS26 406 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 TRIM51Q9BSJ1 452 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 RAB17Q9H0T7 212 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 CALCOCO1Q9P1Z2 691 aa18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 UTP11Q9Y3A2 253 aaKnown RBP18.7■□□□□ 0.58
AC055811.2-201ENST00000427497 GRM6O15303 877 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 LTFP02788 710 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 MAGEA11P43364 429 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 KCNJ1P48048 391 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 ALDH7A1P49419 539 aaKnown RBP18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 CUL1Q13616 776 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 PDK2Q15119 407 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 RTP2Q5QGT7 225 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 SYPL2Q5VXT5 272 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 KAZNQ674X7 775 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 DUPD1Q68J44 220 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 SCYL2Q6P3W7 929 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 DRICH1Q6PGQ1 229 aaPredicted RBP18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 VSTM1Q6UX27 236 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 BBS12Q6ZW61 710 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 VSIG1Q86XK7 387 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 CCDC105Q8IYK2 499 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 RNF168Q8IYW5 571 aaPredicted RBP18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 SNRNP25Q9BV90 132 aaKnown RBP18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 OXCT2Q9BYC2 517 aaPredicted RBP18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 FUT8Q9BYC5 575 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 LMAN2LQ9H0V9 348 aa18.69■□□□□ 0.58
AC055811.2-201ENST00000427497 NSUN3Q9H649 340 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms