RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 FOXC1Q12948 553 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 HNRNPDQ14103 355 aaKnown RBP13.58□□□□□ -0.24
NELFE-203ENST00000426722 FOXD4L6Q3SYB3 417 aaPredicted RBP13.58□□□□□ -0.24
NELFE-203ENST00000426722 UNQ6494/PRO21346Q6UXR6 183 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 FOXD4L3Q6VB84 417 aaPredicted RBP13.58□□□□□ -0.24
NELFE-203ENST00000426722 ARMCX6Q7L4S7 300 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 CHPFQ8IZ52 775 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 HDDC3Q8N4P3 179 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 TTC39CQ8N584 583 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 C12orf29Q8N999 325 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 IPO4Q8TEX9 1081 aaKnown RBP13.58□□□□□ -0.24
NELFE-203ENST00000426722 GABRG3Q99928 467 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 ZDHHC4Q9NPG8 344 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 FAM49BQ9NUQ9 324 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.58□□□□□ -0.24
NELFE-203ENST00000426722 CLIC5Q9NZA1 410 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 HCN2Q9UL51 889 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 WASF3Q9UPY6 502 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 PCNX2A6NKB5 2137 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 ADAMTS9Q9P2N4 1935 aa13.58□□□□□ -0.24
NELFE-203ENST00000426722 A0A1W2PQD8 194 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 TBX18O95935 607 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 SYPP08247 313 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 KRT13P13646 458 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 ITPKAP23677 461 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 RPL13P26373 211 aaKnown RBP13.57□□□□□ -0.24
NELFE-203ENST00000426722 RDXP35241 583 aaKnown RBP13.57□□□□□ -0.24
NELFE-203ENST00000426722 CHKAP35790 457 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 DGKGP49619 791 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 PGFP49763 221 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 KIF11P52732 1056 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 COG7P83436 770 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 DNM1Q05193 864 aaKnown RBP13.57□□□□□ -0.24
NELFE-203ENST00000426722 GFPT1Q06210 699 aaPredicted RBP13.57□□□□□ -0.24
NELFE-203ENST00000426722 SEMA3BQ13214 749 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 C1orf220Q5T0J3 134 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 EGFLAMQ63HQ2 1017 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 SPOPLQ6IQ16 392 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 TPGS1Q6ZTW0 290 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 CCDC186Q7Z3E2 898 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 METTL3Q86U44 580 aaKnown RBP13.57□□□□□ -0.24
NELFE-203ENST00000426722 KDF1Q8NAX2 398 aaPredicted RBP13.57□□□□□ -0.24
NELFE-203ENST00000426722 DEFB124Q8NES8 71 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 ELMO3Q96BJ8 720 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 DUSP16Q9BY84 665 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 ADAM33Q9BZ11 813 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 DCLK3Q9C098 648 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 FAM124BQ9H5Z6 455 aaPredicted RBP13.57□□□□□ -0.24
NELFE-203ENST00000426722 CALCOCO1Q9P1Z2 691 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 HMGXB4Q9UGU5 601 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 FBXO10Q9UK96 956 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 USP3Q9Y6I4 520 aa13.57□□□□□ -0.24
NELFE-203ENST00000426722 MAP1BP46821 2468 aaKnown RBP13.56□□□□□ -0.24
NELFE-203ENST00000426722 IGHV1OR15-9A0A0B4J2B8 117 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 A0A1B0GVL5 298 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 A0A1W2PQH9 124 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 PRRT4C9JH25 899 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 H0Y626 953 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 TRIM24O15164 1050 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 OPHN1O60890 802 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 CILPO75339 1184 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 RHOBTB3O94955 611 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 TRIM16O95361 564 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 CFIP05156 583 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 CISD3P0C7P0 127 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 PFKFB1P16118 471 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 NR2F2P24468 414 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 GTF2H1P32780 548 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 PSMC2P35998 433 aaKnown RBP13.56□□□□□ -0.24
NELFE-203ENST00000426722 MAPK8P45983 427 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 MCCD1P59942 119 aaPredicted RBP13.56□□□□□ -0.24
NELFE-203ENST00000426722 ORC1Q13415 861 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 C10orf120Q5SQS8 335 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 Q6ZNB5 142 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 GPRIN1Q7Z2K8 1008 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 MIB1Q86YT6 1006 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 ZNF419Q96HQ0 510 aaPredicted RBP13.56□□□□□ -0.24
NELFE-203ENST00000426722 TWNKQ96RR1 684 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 UBXN6Q9BZV1 441 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 NIF3L1Q9GZT8 377 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 NMUR1Q9HB89 426 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 CAPN10Q9HC96 672 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 CD248Q9HCU0 757 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 OSER1Q9NX31 292 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 SUSD2Q9UGT4 822 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 HPSEQ9Y251 543 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 SLC27A6Q9Y2P4 619 aa13.56□□□□□ -0.24
NELFE-203ENST00000426722 PCDH15Q96QU1 1955 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 FAM237AA0A1B0GTK4 181 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 C1QTNF9BB2RNN3 333 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 ARHGAP33O14559 1287 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 CYP26A1O43174 497 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 NDUFS2O75306 463 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 STC2O76061 302 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 C1QTNF9P0C862 333 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 NDUFV2P19404 249 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 WASP42768 502 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 SYCP2LQ5T4T6 812 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 KRT39Q6A163 491 aa13.55□□□□□ -0.24
NELFE-203ENST00000426722 PIP4P1Q86T03 277 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms