RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 RBMX2Q9Y388 322 aaKnown RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 A0A0B4J269 797 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 KBTBD13C9JR72 458 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 RNASEH1O60930 286 aaKnown RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 PIAS1O75925 651 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 TTC4O95801 387 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 TBXAS1P24557 533 aaPredicted RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 COILP38432 576 aaPredicted RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 PSMD7P51665 324 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 NAA20P61599 178 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 SMAD1Q15797 465 aaKnown RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 CLUL1Q15846 466 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 SEMA4DQ92854 862 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 CNBD2Q96M20 576 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 SHCBP1LQ9BZQ2 653 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 KLHL4Q9C0H6 718 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 GANQ9H2C0 597 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 GRHL1Q9NZI5 618 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 UMODL1Q5DID0 1318 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 PIK3R2O00459 728 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 HSPA6P17066 643 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 RFX1P22670 979 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 IFRD2Q12894 506 aaPredicted RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 PSMD6Q15008 389 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 PCSK9Q8NBP7 692 aaKnown RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 SNX25Q9H3E2 840 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 PPME1Q9Y570 386 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 LACTBL1A8MY62 500 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 SPECC1L-ADORA2AF8WAN1 911 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 PATL1Q86TB9 770 aaKnown RBP16.54■□□□□ 0.24
PKP4-205ENST00000426248 BRSK2Q8IWQ3 736 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 PRELID2Q8N945 189 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 CASP10Q92851 521 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 FAM193BQ96PV7 902 aaPredicted RBP16.54■□□□□ 0.24
PKP4-205ENST00000426248 GCNAQ96QF7 691 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 MIPEPQ99797 713 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 MED10Q9BTT4 135 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 NDEL1Q9GZM8 345 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 NDUFB5O43674 189 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 ASGR1P07306 291 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 RPA3P35244 121 aaPredicted RBP16.54■□□□□ 0.24
PKP4-205ENST00000426248 RFC1P35251 1148 aaPredicted RBP16.54■□□□□ 0.24
PKP4-205ENST00000426248 C6orf183Q5T699 404 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 SLC39A4Q6P5W5 647 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 FOXR2Q6PJQ5 311 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 DNAJC14Q6Y2X3 702 aaPredicted RBP16.54■□□□□ 0.24
PKP4-205ENST00000426248 STARD7Q9NQZ5 370 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 DOCK1Q14185 1865 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 KIF13BQ9NQT8 1826 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 HNRNPCL1O60812 293 aaKnown RBP16.54■□□□□ 0.24
PKP4-205ENST00000426248 DUSP11O75319 330 aaKnown RBP16.54■□□□□ 0.24
PKP4-205ENST00000426248 CDC16Q13042 620 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 CUL2Q13617 745 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 DGCR14Q96DF8 476 aaKnown RBP16.54■□□□□ 0.24
PKP4-205ENST00000426248 HPDLQ96IR7 371 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 GMEB1Q9Y692 573 aa16.54■□□□□ 0.24
PKP4-205ENST00000426248 XPO1O14980 1071 aaKnown RBP16.53■□□□□ 0.24
PKP4-205ENST00000426248 PDGFRBP09619 1106 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 RAP1GAPP47736 663 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 AP3M2P53677 418 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 CDH8P55286 799 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 TARBP2Q15633 366 aaKnown RBP16.53■□□□□ 0.24
PKP4-205ENST00000426248 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
PKP4-205ENST00000426248 RINLQ6ZS11 566 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 RIPOR1Q6ZS17 1223 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 ENOSF1Q7L5Y1 443 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 OTOAQ7RTW8 1153 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 TRIB2Q92519 343 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 KRT82Q9NSB4 513 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 CSPG5O95196 566 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 WDR4P57081 412 aaKnown RBP16.53■□□□□ 0.24
PKP4-205ENST00000426248 ZBTB46Q86UZ6 589 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 RASGEF1CQ8N431 466 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 OR6Y1Q8NGX8 325 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 BTBD6Q96KE9 485 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 C16orf70Q9BSU1 422 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 GOLGA8MH3BSY2 632 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 ALDH18A1P54886 795 aaKnown RBP16.53■□□□□ 0.24
PKP4-205ENST00000426248 SPOUT1Q5T280 376 aaKnown RBP16.53■□□□□ 0.24
PKP4-205ENST00000426248 MAMDC4Q6UXC1 1216 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 RFWD2Q8NHY2 731 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 ARHGEF26Q96DR7 871 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 HES6Q96HZ4 224 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 RNF208Q9H0X6 261 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 PCDH18Q9HCL0 1135 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 ARFGEF1Q9Y6D6 1849 aa16.53■□□□□ 0.24
PKP4-205ENST00000426248 IL18RAPO95256 599 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 T-ENOLP0DO92 83 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 RBP5P82980 135 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 KCNA10Q16322 511 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 PAN2Q504Q3 1202 aaKnown RBP16.52■□□□□ 0.24
PKP4-205ENST00000426248 JADE1Q6IE81 842 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 NIF3L1Q9GZT8 377 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 C12orf65Q9H3J6 166 aaKnown RBP16.52■□□□□ 0.24
PKP4-205ENST00000426248 Q9H521 79 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 SELENONQ9NZV5 590 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 TUBGCP4Q9UGJ1 667 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 ANAPC7Q9UJX3 599 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 GPR25O00155 361 aa16.52■□□□□ 0.24
PKP4-205ENST00000426248 NFICP08651 508 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms