RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 H0YCG3 227 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 NVLO15381 856 aaKnown RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 AKAP5P24588 427 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 SDC4P31431 198 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 GLRBP48167 497 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 SERPINB4P48594 390 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 GSCP56915 257 aaPredicted RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 YWHAEP62258 255 aaKnown RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 GRAMD1BQ3KR37 738 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 CTU1Q7Z7A3 348 aaKnown RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 SDCCAG8Q86SQ7 713 aaPredicted RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 TNS4Q8IZW8 715 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 MPP5Q8N3R9 675 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 ANKLE1Q8NAG6 615 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 YY1AP1Q9H869 796 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 TSPAN16Q9UKR8 245 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 KRT37O76014 449 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 ASS1P00966 412 aaKnown RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 ACAT1P24752 427 aaKnown RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 HADHBP55084 474 aaKnown RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 PTPN11Q06124 597 aaPredicted RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 BST1Q10588 318 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 RINLQ6ZS11 566 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 PYROXD2Q8N2H3 581 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 RNF34Q969K3 372 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 FBXL18Q96ME1 805 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 ZNF358Q9NW07 568 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 FNDC3AQ9Y2H6 1198 aaKnown RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 NUMBLQ9Y6R0 609 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 LAMA2P24043 3122 aaKnown RBP13.87□□□□□ -0.19
USP42-203ENST00000426246 SNAI1O95863 264 aaPredicted RBP13.87□□□□□ -0.19
USP42-203ENST00000426246 STAG3L1P0CL83 205 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 TPH1P17752 444 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 AMPD1P23109 780 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 GCAP28676 217 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 MLH1P40692 756 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 GBE1Q04446 702 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 GOLGA7BQ2TAP0 167 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 KLHL38Q2WGJ6 581 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 GPR142Q7Z601 462 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 ZNF467Q7Z7K2 595 aaPredicted RBP13.87□□□□□ -0.19
USP42-203ENST00000426246 C12orf50Q8NA57 414 aaPredicted RBP13.87□□□□□ -0.19
USP42-203ENST00000426246 FAM136AQ96C01 138 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 LGMNQ99538 433 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 EBF4Q9BQW3 602 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 RNPEPL1Q9HAU8 725 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 PCDH9Q9HC56 1237 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 ARHGEF3Q9NR81 526 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 A8MXQ7 604 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 FAM110CQ1W6H9 321 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 PAN2Q504Q3 1202 aaKnown RBP13.87□□□□□ -0.19
USP42-203ENST00000426246 RAPH1Q70E73 1250 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 ZNF677Q86XU0 584 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 RASAL3Q86YV0 1011 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 RNF135Q8IUD6 432 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 SPATA6LQ8N4H0 392 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 SHKBP1Q8TBC3 707 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 PPP4R1Q8TF05 950 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 STK32AQ8WU08 396 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 SCG3Q8WXD2 468 aaKnown RBP13.87□□□□□ -0.19
USP42-203ENST00000426246 IGKV6-21A0A0C4DH24 114 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 DPPA5A6NC42 116 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 MTA2O94776 668 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 ETS2P15036 469 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 CALB2P22676 271 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 PPM1JQ5JR12 505 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 PLPPR4Q7Z2D5 763 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 E2F7Q96AV8 911 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 NSL1Q96IY1 281 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 CADM1Q9BY67 442 aaKnown RBP13.87□□□□□ -0.19
USP42-203ENST00000426246 ASNSD1Q9NWL6 643 aa13.87□□□□□ -0.19
USP42-203ENST00000426246 TIMM13Q9Y5L4 95 aaPredicted RBP13.87□□□□□ -0.19
USP42-203ENST00000426246 ASB14A6NK59 587 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 ALOX15BO15296 676 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 STRNO43815 780 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 MAFO75444 373 aaPredicted RBP13.86□□□□□ -0.19
USP42-203ENST00000426246 CCNA1P78396 465 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 CRLF3Q8IUI8 442 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 AZIN2Q96A70 460 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 GRAMD1AQ96CP6 724 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 SCYL1Q96KG9 808 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 MARK4Q96L34 752 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 RNPEPQ9H4A4 650 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 GOLGA2P5Q9HBQ8 144 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 WDR27A2RRH5 827 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 E9PBE3 544 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 GPR25O00155 361 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 KLHL41O60662 606 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 CCDC22O60826 627 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 TRPA1O75762 1119 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 AVPR1AP37288 418 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 PHF13Q86YI8 300 aaPredicted RBP13.86□□□□□ -0.19
USP42-203ENST00000426246 MAP7D3Q8IWC1 876 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 AGGF1Q8N302 714 aaeCLIP13.86□□□□□ -0.19
USP42-203ENST00000426246 PNPLA1Q8N8W4 532 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 PIP4K2CQ8TBX8 421 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 CCHCR1Q8TD31 782 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 MPHOSPH6Q99547 160 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms