RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 CBWD3Q5JTY5 395 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 CBWD5Q5RIA9 395 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PRUNE1Q86TP1 453 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PALB2Q86YC2 1186 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 EXD1Q8NHP7 514 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 TRPM4Q8TD43 1214 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 SMARCD1Q96GM5 515 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 VPS50Q96JG6 964 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 MAGEB10Q96LZ2 347 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 GAD1Q99259 594 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PAFAH2Q99487 392 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 FAM129AQ9BZQ8 928 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 LRRC40Q9H9A6 602 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 CACNA2D2Q9NY47 1150 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 GPRC5DQ9NZD1 345 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 VPS9D1Q9Y2B5 631 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 MYPNQ86TC9 1320 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 O00370 1275 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PLCL1Q15111 1095 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 NFE2Q16621 373 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ERAP2Q6P179 960 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 OTOAQ7RTW8 1153 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 LRRC34Q8IZ02 419 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 MYO1HQ8N1T3 1032 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 GLIS3Q8NEA6 775 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 INPP5DQ92835 1189 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 CDC42EP4Q9H3Q1 356 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 FRMPD4Q14CM0 1322 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 MAP3K13O43283 966 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 AP5Z1O43299 807 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 RECQL4O94761 1208 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 GLP2RO95838 553 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 GUCA1CO95843 209 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 AMHP03971 560 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 UBE3AQ05086 875 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 CAMK2GQ13555 558 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ILDR2Q71H61 639 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 THUMPD3Q9BV44 507 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 EIF2AQ9BY44 585 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 UBE2OQ9C0C9 1292 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ILKAPQ9H0C8 392 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PABPC3Q9H361 631 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 C10orf88Q9H8K7 445 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 BLOC1S4Q9NUP1 217 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 GID8Q9NWU2 228 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PHTF1Q9UMS5 762 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 IPPQ9Y573 584 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 GLRA3O75311 464 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 CRTAMO95727 393 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 HSPA1AP0DMV8 641 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 HSPA1BP0DMV9 641 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 MAPTP10636 758 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ITGALP20701 1170 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 SCNN1GP51170 649 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 RHBDL3P58872 404 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PPIL2Q13356 520 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 CELF3Q5SZQ8 465 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 CES3Q6UWW8 571 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 LGI2Q8N0V4 545 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 DEFB106AQ8N104 65 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ACTL9Q8TC94 416 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 BTN2A2Q8WVV5 523 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 KCNK16Q96T55 309 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 SMAD5Q99717 465 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 AGXT2Q9BYV1 514 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 FRMD8P1Q9BZ68 369 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 WHRNQ9P202 907 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 DCDC2Q9UHG0 476 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 VANGL2Q9ULK5 521 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 TRPC5OSA6NMA1 111 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 ERI2A8K979 691 aaKnown RBP8.15□□□□□ -1.1
CTNND1-207ENST00000426142 TPST1O60507 370 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 TFE3P19532 575 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-207ENST00000426142 YWHAQP27348 245 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 KPNA1P52294 538 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-207ENST00000426142 NCALDP61601 193 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 PLOD1Q02809 727 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-207ENST00000426142 STARD3Q14849 445 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 TJAP1Q5JTD0 557 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 GJC2Q5T442 439 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-207ENST00000426142 GRAMD4Q6IC98 578 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 TMCO5AQ8N6Q1 288 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 ECSITQ9BQ95 431 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 EMILIN2Q9BXX0 1053 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 ADGRE3Q9BY15 652 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 GPAMQ9HCL2 828 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 PTPRHQ9HD43 1115 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 CYP39A1Q9NYL5 469 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 WDR27A2RRH5 827 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 EVPLLA8MZ36 301 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 AGRPO00253 132 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 KDM1AO60341 852 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 FGFR1P11362 822 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 TAF2Q6P1X5 1199 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 TPGS1Q6ZTW0 290 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 NIPA1Q7RTP0 329 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 ZNF410Q86VK4 478 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 VPS37AQ8NEZ2 397 aa8.15□□□□□ -1.1
CTNND1-207ENST00000426142 FBXO25Q8TCJ0 367 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms