RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 DENND1BQ6P3S1 775 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 DENND5BQ6ZUT9 1274 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 MON1BQ7L1V2 547 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 GPRIN1Q7Z2K8 1008 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 ITIH5Q86UX2 942 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 CPA5Q8WXQ8 436 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 TCEAL4Q96EI5 215 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 LRRC3Q9BY71 257 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 LHX5Q9H2C1 402 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 VIPAS39Q9H9C1 493 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 WDR6Q9NNW5 1121 aaKnown RBP16.36■□□□□ 0.21
SHOX2-202ENST00000425436 PARVAQ9NVD7 372 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.36■□□□□ 0.21
SHOX2-202ENST00000425436 ASB3Q9Y575 518 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 PCDHA3Q9Y5H8 950 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 ZNF638Q14966 1978 aaKnown RBP16.36■□□□□ 0.21
SHOX2-202ENST00000425436 TCF20Q9UGU0 1960 aaKnown RBP16.35■□□□□ 0.21
SHOX2-202ENST00000425436 HHLA1C9JL84 531 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 TNFRSF10BO14763 440 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 ABCB7O75027 752 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 POU2F2P09086 479 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 CSH1P0DML2 217 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 CSH2P0DML3 217 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 SP100P23497 879 aaPredicted RBP16.35■□□□□ 0.21
SHOX2-202ENST00000425436 CDH5P33151 784 aaPredicted RBP16.35■□□□□ 0.21
SHOX2-202ENST00000425436 CCR2P41597 374 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 SLC5A9Q2M3M2 681 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 PKDCCQ504Y2 493 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 CYP4A22Q5TCH4 519 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 SEL1L2Q5TEA6 688 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 TMC8Q8IU68 726 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 PASD1Q8IV76 773 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 NUP93Q8N1F7 819 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 ITFG1Q8TB96 612 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 RUNDC3BQ96NL0 473 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 ASAH2Q9NR71 780 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 PIK3R2O00459 728 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 SEC31AO94979 1220 aaKnown RBP16.35■□□□□ 0.21
SHOX2-202ENST00000425436 FSHRP23945 695 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 CTNNA1P35221 906 aaKnown RBP16.35■□□□□ 0.21
SHOX2-202ENST00000425436 SLC5A3P53794 718 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 BCAT1P54687 386 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 RWDD2BP57060 319 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 MRPS5P82675 430 aaKnown RBP16.35■□□□□ 0.21
SHOX2-202ENST00000425436 BST2Q10589 180 aaKnown RBP16.35■□□□□ 0.21
SHOX2-202ENST00000425436 STILQ15468 1287 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 PLEKHA7Q6IQ23 1121 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 EMBQ6PCB8 327 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 PDZD4Q76G19 769 aaPredicted RBP16.35■□□□□ 0.21
SHOX2-202ENST00000425436 PIGZQ86VD9 579 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 ING5Q8WYH8 240 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 CD101Q93033 1021 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 KRT12Q99456 494 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 EHD2Q9NZN4 543 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 ANAPC7Q9UJX3 599 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 STRIP2Q9ULQ0 834 aa16.35■□□□□ 0.21
SHOX2-202ENST00000425436 MRPS23Q9Y3D9 190 aaKnown RBP16.35■□□□□ 0.21
SHOX2-202ENST00000425436 CLUHO75153 1309 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 A0A1W2PRU2 124 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 FGGP02679 453 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 MMP8P22894 467 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 RRM1P23921 792 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 GABRR2P28476 465 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 RGS7P49802 495 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 PEX5P50542 639 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 SLC8A3P57103 927 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 RNASE9P60153 205 aaKnown RBP16.34■□□□□ 0.21
SHOX2-202ENST00000425436 NNTQ13423 1086 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 SMAD2Q15796 467 aaKnown RBP16.34■□□□□ 0.21
SHOX2-202ENST00000425436 AAK1Q2M2I8 961 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 PMF1Q6P1K2 205 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 GAREM2Q75VX8 874 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 GET4Q7L5D6 327 aaPredicted RBP16.34■□□□□ 0.21
SHOX2-202ENST00000425436 WDTC1Q8N5D0 677 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 SLC35F5Q8WV83 523 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 MAIP1Q8WWC4 291 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 ATXN2LQ8WWM7 1075 aaKnown RBP16.34■□□□□ 0.21
SHOX2-202ENST00000425436 NECTIN4Q96NY8 510 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 IL21Q9HBE4 155 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 GDF3Q9NR23 364 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 SMARCAL1Q9NZC9 954 aa16.34■□□□□ 0.21
SHOX2-202ENST00000425436 CHORDC1Q9UHD1 332 aaPredicted RBP16.34■□□□□ 0.21
SHOX2-202ENST00000425436 TMEM110-MUSTN1A8MSY1 372 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 XPO1O14980 1071 aaKnown RBP16.33■□□□□ 0.2
SHOX2-202ENST00000425436 MOSPD3O75425 235 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 YWHAQP27348 245 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 MAN1A1P33908 653 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 GPD2P43304 727 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 EPHA5P54756 1037 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 PTP4A2Q12974 167 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 PUS10Q3MIT2 529 aaKnown RBP16.33■□□□□ 0.2
SHOX2-202ENST00000425436 PRSS36Q5K4E3 855 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 TMEM150AQ86TG1 271 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 ST13P5Q8NFI4 369 aaPredicted RBP16.33■□□□□ 0.2
SHOX2-202ENST00000425436 SHKBP1Q8TBC3 707 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 MYRFLQ96LU7 910 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 ASB2Q96Q27 587 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 UBXN6Q9BZV1 441 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 MIS12Q9H081 205 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 ATXN3LQ9H3M9 355 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms