RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CYP17A1P05093 508 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 ACADSBP45954 432 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 GALK1P51570 392 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 APBA1Q02410 837 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 CSTF1Q05048 431 aaKnown RBP11.47□□□□□ -0.57
USP49-204ENST00000423567 GAD2Q05329 585 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 CCINQ13939 588 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 KRT31Q15323 416 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 FBXO43Q4G163 708 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 TMEM196Q5HYL7 178 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 PMF1Q6P1K2 205 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 HTR3DQ70Z44 454 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 BBS7Q8IWZ6 715 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 ADGRG2Q8IZP9 1017 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 SCML4Q8N228 414 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 SPEM1Q8N4L4 309 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 ZNF606Q8WXB4 792 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 IRGQQ8WZA9 623 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 NOX5Q96PH1 765 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 ZSWIM1Q9BR11 485 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 LSM14BQ9BX40 385 aaKnown RBP11.47□□□□□ -0.57
USP49-204ENST00000423567 DCLK3Q9C098 648 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 VPS16Q9H269 839 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 SIX2Q9NPC8 291 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 ABCC13Q9NSE7 274 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 RBM12Q9NTZ6 932 aaKnown RBP11.47□□□□□ -0.57
USP49-204ENST00000423567 MARCH2Q9P0N8 246 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 ZNF510Q9Y2H8 683 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 DENND4CQ5VZ89 1909 aa11.47□□□□□ -0.57
USP49-204ENST00000423567 COL4A2P08572 1712 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 SLC12A8A0AV02 714 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 SMTNL1A8MU46 457 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.46□□□□□ -0.57
USP49-204ENST00000423567 SP9P0CG40 484 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 ADH5P11766 374 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 KRT9P35527 623 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 CXCL12P48061 93 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 SNX16P57768 344 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 DAOAP59103 153 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 MMRN1Q13201 1228 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 KLHL40Q2TBA0 621 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 ANO4Q32M45 955 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 ZNF528Q3MIS6 628 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 PREPLQ4J6C6 727 aaPredicted RBP11.46□□□□□ -0.57
USP49-204ENST00000423567 ANO6Q4KMQ2 910 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 KLHDC7AQ5VTJ3 777 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 BSPRYQ5W0U4 402 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 FSTL4Q6MZW2 842 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 NUDT18Q6ZVK8 323 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 STK32AQ8WU08 396 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 CHFRQ96EP1 664 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 PCMTD1Q96MG8 357 aaPredicted RBP11.46□□□□□ -0.57
USP49-204ENST00000423567 TRIM62Q9BVG3 475 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 PDCL3Q9H2J4 239 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 SPHK2Q9NRA0 654 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 CEP83Q9Y592 693 aa11.46□□□□□ -0.57
USP49-204ENST00000423567 ZNF638Q14966 1978 aaKnown RBP11.46□□□□□ -0.58
USP49-204ENST00000423567 MYH10P35580 1976 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 ANAPC1Q9H1A4 1944 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 PATJQ8NI35 1801 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 YJEFN3A6XGL0 299 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 BECN2A8MW95 431 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 E7ENQ6 273 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 FOXN3O00409 490 aaPredicted RBP11.45□□□□□ -0.58
USP49-204ENST00000423567 PIK3R2O00459 728 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 EGFP01133 1207 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 HMBSP08397 361 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 UCHL3P15374 230 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 EIF2DP41214 584 aaKnown RBP11.45□□□□□ -0.58
USP49-204ENST00000423567 NBL1P41271 181 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 GPD2P43304 727 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 COPB1P53618 953 aaKnown RBP11.45□□□□□ -0.58
USP49-204ENST00000423567 NRLP54845 237 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 KCNMA1Q12791 1236 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 DRAP1Q14919 205 aaPredicted RBP11.45□□□□□ -0.58
USP49-204ENST00000423567 LY6G5CQ5SRR4 150 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 DENND1BQ6P3S1 775 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 RHBDF2Q6PJF5 856 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 Q6ZS52 159 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 AOPEPQ8N6M6 819 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 ATRIPQ8WXE1 791 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 NDRG1Q92597 394 aaKnown RBP11.45□□□□□ -0.58
USP49-204ENST00000423567 EDEM1Q92611 657 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 FAM149B1Q96BN6 582 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 PLD4Q96BZ4 506 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 XPO6Q96QU8 1125 aaKnown RBP11.45□□□□□ -0.58
USP49-204ENST00000423567 PNKPQ96T60 521 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 FAM126AQ9BYI3 521 aaPredicted RBP11.45□□□□□ -0.58
USP49-204ENST00000423567 MIS12Q9H081 205 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 ACP6Q9NPH0 428 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 PLCB1Q9NQ66 1216 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 PRMT8Q9NR22 394 aaPredicted RBP11.45□□□□□ -0.58
USP49-204ENST00000423567 WDR35Q9P2L0 1181 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 LIMA1Q9UHB6 759 aaKnown RBP11.45□□□□□ -0.58
USP49-204ENST00000423567 DAAM1Q9Y4D1 1078 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 FHOD1Q9Y613 1164 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 F5P12259 2224 aa11.45□□□□□ -0.58
USP49-204ENST00000423567 RNF40O75150 1001 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 STC2O76061 302 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 LTFP02788 710 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 457.8 ms