RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 BRCA1P38398 1863 aaKnown RBP16.39■□□□□ 0.21
CDH1-202ENST00000422392 DNAJC6O75061 913 aa16.39■□□□□ 0.21
CDH1-202ENST00000422392 KRT37O76014 449 aa16.39■□□□□ 0.21
CDH1-202ENST00000422392 TGDSO95455 350 aa16.39■□□□□ 0.21
CDH1-202ENST00000422392 ENO1P06733 434 aaKnown RBP16.39■□□□□ 0.21
CDH1-202ENST00000422392 MUM1Q2TAK8 710 aa16.39■□□□□ 0.21
CDH1-202ENST00000422392 PLPPR4Q7Z2D5 763 aa16.39■□□□□ 0.21
CDH1-202ENST00000422392 TXNRD2Q9NNW7 524 aa16.39■□□□□ 0.21
CDH1-202ENST00000422392 BARX2Q9UMQ3 279 aaPredicted RBP16.39■□□□□ 0.21
CDH1-202ENST00000422392 HMX2A2RU54 273 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 H3BRJ5 948 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 ARF4P18085 180 aaPredicted RBP16.38■□□□□ 0.21
CDH1-202ENST00000422392 ATP6V1C1P21283 382 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 GBE1Q04446 702 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 RCN2Q14257 317 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 TMEM132DQ14C87 1099 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 DNAJC9Q8WXX5 260 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 KLC2Q9H0B6 622 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 GBA2Q9HCG7 927 aaPredicted RBP16.38■□□□□ 0.21
CDH1-202ENST00000422392 CEP350Q5VT06 3117 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 E7ENQ6 273 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 CAPN9O14815 690 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 HCRTO43612 131 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 SPAG6O75602 509 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 APOEP02649 317 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 TUBP50607 506 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 SLC10A2Q12908 348 aaPredicted RBP16.38■□□□□ 0.21
CDH1-202ENST00000422392 AMHR2Q16671 573 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 Q3C1V9 767 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 NOL9Q5SY16 702 aaKnown RBP16.38■□□□□ 0.21
CDH1-202ENST00000422392 ZNF534Q76KX8 674 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 ACOT1Q86TX2 421 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 TTC30AQ86WT1 665 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 MAP7D3Q8IWC1 876 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 CLEC4CQ8WTT0 213 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 E2F7Q96AV8 911 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 PNPLA8Q9NP80 782 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDH1-202ENST00000422392 MFHAS1Q9Y4C4 1052 aa16.38■□□□□ 0.21
CDH1-202ENST00000422392 I3L4J1 428 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 IRF6O14896 467 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 HNRNPCL1O60812 293 aaKnown RBP16.37■□□□□ 0.21
CDH1-202ENST00000422392 TBX10O75333 385 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 TXNP10599 105 aaKnown RBP16.37■□□□□ 0.21
CDH1-202ENST00000422392 PEX19P40855 299 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 CRADDP78560 199 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 KDSRQ06136 332 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 LCLAT1Q6UWP7 414 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 KHSRPQ92945 711 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDH1-202ENST00000422392 CLPTM1LQ96KA5 538 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 DPP3Q9NY33 737 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 PPARGC1AQ9UBK2 798 aaKnown RBP16.37■□□□□ 0.21
CDH1-202ENST00000422392 AKT3Q9Y243 479 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 NME7Q9Y5B8 376 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 B2RBV5 119 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 PPEF2O14830 753 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 GABBR2O75899 941 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 LUC7L3O95232 432 aaKnown RBP16.37■□□□□ 0.21
CDH1-202ENST00000422392 C22orf31O95567 290 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 RARBP10826 455 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 INSRRP14616 1297 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 AMPD1P23109 780 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 PRKCHP24723 683 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 SDC4P31431 198 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 SNX30Q5VWJ9 437 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 OLFML1Q6UWY5 402 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 NUDCD3Q8IVD9 361 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 NDUFAF2Q8N183 169 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 TEX9Q8N6V9 391 aa16.37■□□□□ 0.21
CDH1-202ENST00000422392 MRPL45Q9BRJ2 306 aaKnown RBP16.37■□□□□ 0.21
CDH1-202ENST00000422392 PRMT7Q9NVM4 692 aaPredicted RBP16.37■□□□□ 0.21
CDH1-202ENST00000422392 DPPA5A6NC42 116 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 CNMDO75829 334 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 AQP5P55064 265 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 HDAC4P56524 1084 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 THOC5Q13769 683 aaKnown RBP16.36■□□□□ 0.21
CDH1-202ENST00000422392 PDCD7Q8N8D1 485 aaKnown RBP16.36■□□□□ 0.21
CDH1-202ENST00000422392 RTP4Q96DX8 246 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 FAM161BQ96MY7 647 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 EBF4Q9BQW3 602 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 NT5C1AQ9BXI3 368 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 SMARCAD1Q9H4L7 1026 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 CYP3A43Q9HB55 503 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 ZFATQ9P243 1243 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 PPME1Q9Y570 386 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 NVLO15381 856 aaKnown RBP16.36■□□□□ 0.21
CDH1-202ENST00000422392 PAPSS1O43252 624 aaPredicted RBP16.36■□□□□ 0.21
CDH1-202ENST00000422392 HBP1O60381 514 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 PSMG1O95456 288 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 LINGO3P0C6S8 592 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 P4HA1P13674 534 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 CYP2F1P24903 491 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 ADORA2AP29274 412 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 PGM1P36871 562 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 CCNHP51946 323 aaPredicted RBP16.36■□□□□ 0.21
CDH1-202ENST00000422392 ALDH18A1P54886 795 aaKnown RBP16.36■□□□□ 0.21
CDH1-202ENST00000422392 INCA1Q0VD86 236 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 BOLA3Q53S33 107 aa16.36■□□□□ 0.21
CDH1-202ENST00000422392 SLC9A4Q6AI14 798 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms