RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CSH1P0DML2 217 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CSH2P0DML3 217 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 GLUD2P49448 558 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 RHOAP61586 193 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 PDCLQ13371 301 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 RETSATQ6NUM9 610 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CCNYL1Q8N7R7 359 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 APBB2Q92870 758 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 SNX27Q96L92 541 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CDK5RAP1Q96SZ6 601 aaKnown RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 TRIM51Q9BSJ1 452 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 TRIM54Q9BYV2 358 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 GJD2Q9UKL4 321 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CDH9Q9ULB4 789 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CFAP99D6REC4 459 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 OR4Q2P0C623 313 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 NPR3P17342 541 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 OR1E1P30953 314 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 SRRM1Q8IYB3 904 aaKnown RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 BLOC1S5Q8TDH9 187 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 C9orf72Q96LT7 481 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 PCDHB18PQ96TA0 734 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 PAK5Q9P286 719 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 AJAP1Q9UKB5 411 aaPredicted RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 REXO2Q9Y3B8 237 aaKnown RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 RASA4BC9J798 803 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 TRIM66O15016 1216 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 RASA4O43374 803 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 CIB2O75838 187 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 SCNN1BP51168 640 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 FPGSQ05932 587 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 DHX34Q14147 1143 aaKnown RBP10.08□□□□□ -0.8
CMSS1-201ENST00000421999 MMEL1Q495T6 779 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 PPP1R26Q5T8A7 1209 aaPredicted RBP10.08□□□□□ -0.8
CMSS1-201ENST00000421999 TFB1MQ8WVM0 346 aaKnown RBP10.08□□□□□ -0.8
CMSS1-201ENST00000421999 KAT2BQ92831 832 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 MYLPFQ96A32 169 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 VCPIP1Q96JH7 1222 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 OLA1Q9NTK5 396 aaKnown RBP10.08□□□□□ -0.8
CMSS1-201ENST00000421999 DERAQ9Y315 318 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 PJA2O43164 708 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 RAMP2O60895 175 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 VNN1O95497 513 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 TAC1P20366 129 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 STX1BP61266 288 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 ZNF268Q14587 947 aaPredicted RBP10.08□□□□□ -0.8
CMSS1-201ENST00000421999 HECTD3Q5T447 861 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 MEI1Q5TIA1 1274 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 SLC13A5Q86YT5 568 aaPredicted RBP10.08□□□□□ -0.8
CMSS1-201ENST00000421999 HS6ST3Q8IZP7 471 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 LGI2Q8N0V4 545 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 PXYLP1Q8TE99 480 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 ATG4AQ8WYN0 398 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 HHIPL1Q96JK4 782 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 TLR10Q9BXR5 811 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 ATP13A1Q9HD20 1204 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 SIX2Q9NPC8 291 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 RBM47A0AV96 593 aaKnown RBP10.08□□□□□ -0.8
CMSS1-201ENST00000421999 ZNF263O14978 683 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 CHEK2O96017 543 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 HSPA1AP0DMV8 641 aaKnown RBP10.08□□□□□ -0.8
CMSS1-201ENST00000421999 HSPA1BP0DMV9 641 aaKnown RBP10.08□□□□□ -0.8
CMSS1-201ENST00000421999 GGCXP38435 758 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 PBX3P40426 434 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 TUBP50607 506 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 LILRA4P59901 499 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 VSNL1P62760 191 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 NOMO3P69849 1222 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 STMN2Q93045 179 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 XPO6Q96QU8 1125 aaKnown RBP10.08□□□□□ -0.8
CMSS1-201ENST00000421999 SLC13A1Q9BZW2 595 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 SLC7A5P2Q9GIP4 190 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 VANGL2Q9ULK5 521 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 COQ4Q9Y3A0 265 aa10.08□□□□□ -0.8
CMSS1-201ENST00000421999 IGKV6-21A0A0C4DH24 114 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 ZNF189O75820 626 aaPredicted RBP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 RFC1P35251 1148 aaPredicted RBP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 FAM187BQ17R55 369 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 KLHL38Q2WGJ6 581 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 TRIM60Q495X7 471 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 PAPD7Q5XG87 772 aaKnown RBP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 B4GALNT4Q76KP1 1039 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 NPAS4Q8IUM7 802 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 TRIM42Q8IWZ5 723 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 FAM161BQ96MY7 647 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 APOL2Q9BQE5 337 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 MED4Q9NPJ6 270 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 ZC3H7BQ9UGR2 993 aaKnown RBP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 PKP3Q9Y446 797 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 ACADMP11310 421 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 GABRR2P28476 465 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 EIF3BP55884 814 aaKnown RBP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 CASP8Q14790 479 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 ZRANB3Q5FWF4 1079 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 FGD4Q96M96 766 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 RBM15Q96T37 977 aaKnown RBP eCLIP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 PDLIM7Q9NR12 457 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 CEP290O15078 2479 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 RASSF10A6NK89 507 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 RALBP11234 206 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms