RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 BCO2Q9BYV7 579 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 WDR81Q562E7 1941 aa13.85□□□□□ -0.19
MCF2L-213ENST00000421756 LGR5O75473 907 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 MCF2P10911 925 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 KCNA4P22459 653 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 SULT1E1P49888 294 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 TFDP2Q14188 446 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 LACTB2Q53H82 288 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 HEATR6Q6AI08 1181 aaKnown RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 PQLC3Q8N755 202 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 KHSRPQ92945 711 aaKnown RBP eCLIP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 AZIN2Q96A70 460 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 PPARGC1AQ9UBK2 798 aaKnown RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 ENO1P06733 434 aaKnown RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 TROVE2P10155 538 aaKnown RBP eCLIP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 MYL2P10916 166 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 ALDH18A1P54886 795 aaKnown RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 BNIP1Q12981 228 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 HFE2Q6ZVN8 426 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 APBB1IPQ7Z5R6 666 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 RSPH3Q86UC2 560 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 CMASQ8NFW8 434 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 KCNK16Q96T55 309 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 SMYD2Q9NRG4 433 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 LGALS13Q9UHV8 139 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 CXCL11O14625 94 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 EDF1O60869 148 aaKnown RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 LYPLA1O75608 230 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 DNAJC8O75937 253 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 PDHA1P08559 390 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 CSH1P0DML2 217 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 CSH2P0DML3 217 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 IL4RP24394 825 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 ARFIP2P53365 341 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 YWHAZP63104 245 aaKnown RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 SOX4Q06945 474 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 CHI3L2Q15782 390 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 RFWD3Q6PCD5 774 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 VPS52Q8N1B4 723 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 MCRS1Q96EZ8 462 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 CELF6Q96J87 481 aaKnown RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 SRPK1Q96SB4 655 aaKnown RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 KLC2Q9H0B6 622 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 ACSS3Q9H6R3 686 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 ZNF358Q9NW07 568 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 WDR35Q9P2L0 1181 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 NKX1-2Q9UD57 310 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-213ENST00000421756 PACSIN3Q9UKS6 424 aa13.84□□□□□ -0.19
MCF2L-213ENST00000421756 CASTOR2A6NHX0 329 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 M0QYT0 321 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 SRGAP2BP0DMP2 458 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 PDE1BQ01064 536 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 SLC6A3Q01959 620 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 PPM1JQ5JR12 505 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 PID1Q7Z2X4 250 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 SUGP1Q8IWZ8 645 aaKnown RBP13.83□□□□□ -0.19
MCF2L-213ENST00000421756 SLC25A41Q8N5S1 370 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 NPLOC4Q8TAT6 608 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 DCAKDQ8WVC6 231 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 PGBD4Q96DM1 585 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 VPS11Q9H270 941 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 LHX5Q9H2C1 402 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 ZMYND8Q9ULU4 1186 aaPredicted RBP13.83□□□□□ -0.19
MCF2L-213ENST00000421756 USH1CQ9Y6N9 552 aa13.83□□□□□ -0.19
MCF2L-213ENST00000421756 DOCK3Q8IZD9 2030 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 RPL10AP62906 217 aaKnown RBP13.83□□□□□ -0.2
MCF2L-213ENST00000421756 NOMO1Q15155 1222 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 CCDC6Q16204 474 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 PDK4Q16654 411 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 KLHL38Q2WGJ6 581 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 MARCH8Q5T0T0 291 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 SYPL2Q5VXT5 272 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 WSCD1Q658N2 575 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 CCDC91Q7Z6B0 441 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 PCGF5Q86SE9 256 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 DNAAF3Q8N9W5 541 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 SLC7A14Q8TBB6 771 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 MROH8Q9H579 483 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 LRRC4Q9HBW1 653 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 MYCP01106 439 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-213ENST00000421756 ERVK-10P10266 1014 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 TKTP29401 623 aaKnown RBP13.83□□□□□ -0.2
MCF2L-213ENST00000421756 HOXA11P31270 313 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-213ENST00000421756 CCNA1P78396 465 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 ACVR2BQ13705 512 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 ZNF484Q5JVG2 852 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 GPR142Q7Z601 462 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 PIGZQ86VD9 579 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 TBC1D10AQ9BXI6 508 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 TMEM120AQ9BXJ8 343 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 GCOM2Q9BZD3 368 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-213ENST00000421756 NRDE2Q9H7Z3 1164 aa13.83□□□□□ -0.2
MCF2L-213ENST00000421756 SMG5Q9UPR3 1016 aaKnown RBP13.83□□□□□ -0.2
MCF2L-213ENST00000421756 IQANK1A0A1B0GTG1 560 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 HIC1Q14526 733 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 BEST2Q8NFU1 509 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 MCUR1Q96AQ8 359 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 TRIM55Q9BYV6 548 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 ASB7Q9H672 318 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms