RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CBX2Q14781 532 aaPredicted RBP16.43■□□□□ 0.22
DDX55-203ENST00000421670 C10orf120Q5SQS8 335 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 HECTD3Q5T447 861 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 ZNF564Q8TBZ8 553 aaPredicted RBP16.43■□□□□ 0.22
DDX55-203ENST00000421670 ADAM32Q8TC27 787 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 RFFLQ8WZ73 363 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 BTBD6Q96KE9 485 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 CFAP57Q96MR6 1250 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 CYP2S1Q96SQ9 504 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 MRPL47Q9HD33 250 aaKnown RBP16.43■□□□□ 0.22
DDX55-203ENST00000421670 DUSP10Q9Y6W6 482 aa16.43■□□□□ 0.22
DDX55-203ENST00000421670 C2CD4BA6NLJ0 364 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 TFE3P19532 575 aaPredicted RBP16.42■□□□□ 0.22
DDX55-203ENST00000421670 MATKP42679 507 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 TUBP50607 506 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 OGDHQ02218 1023 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 TFF2Q03403 129 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 EFEMP1Q12805 493 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 SMAD4Q13485 552 aaKnown RBP16.42■□□□□ 0.22
DDX55-203ENST00000421670 ARHGAP15Q53QZ3 475 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 NPAS3Q8IXF0 933 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 ARL14EPQ8N8R7 260 aaPredicted RBP16.42■□□□□ 0.22
DDX55-203ENST00000421670 SLC35G2Q8TBE7 412 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 DQX1Q8TE96 717 aaKnown RBP16.42■□□□□ 0.22
DDX55-203ENST00000421670 RNF139Q8WU17 664 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 RXFP2Q8WXD0 754 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 SUSD6Q92537 303 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 ZSWIM3Q96MP5 696 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 TRIM62Q9BVG3 475 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 SLC46A2Q9BY10 475 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 ADAM33Q9BZ11 813 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 NACA2Q9H009 215 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 RNF38Q9H0F5 515 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.42■□□□□ 0.22
DDX55-203ENST00000421670 ANAPC7Q9UJX3 599 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 PPP2R2CQ9Y2T4 447 aa16.42■□□□□ 0.22
DDX55-203ENST00000421670 TMEM191CA6NGB0 347 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 MSI1O43347 362 aaKnown RBP16.41■□□□□ 0.22
DDX55-203ENST00000421670 MBTPS2O43462 519 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 CKMP06732 381 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 PDGFRAP16234 1089 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 GPD1P21695 349 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 SP100P23497 879 aaPredicted RBP16.41■□□□□ 0.22
DDX55-203ENST00000421670 NOS2P35228 1153 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 ZNF252P-AS1Q0IIN9 211 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 CDO1Q16878 200 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 C15orf59Q2T9L4 293 aaPredicted RBP16.41■□□□□ 0.22
DDX55-203ENST00000421670 OTUD1Q5VV17 481 aaPredicted RBP16.41■□□□□ 0.22
DDX55-203ENST00000421670 ARCQ7LC44 396 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 TAC4Q86UU9 113 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 MIB1Q86YT6 1006 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 FGF13Q92913 245 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 SMG9Q9H0W8 520 aaKnown RBP16.41■□□□□ 0.22
DDX55-203ENST00000421670 UVRAGQ9P2Y5 699 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 SFMBT1Q9UHJ3 866 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 RASAL2Q9UJF2 1139 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 SALL4Q9UJQ4 1053 aa16.41■□□□□ 0.22
DDX55-203ENST00000421670 SYNJ2BP-COX16A0A087WUM0 186 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 PJA2O43164 708 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 SULT1E1P49888 294 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 ATP11AP98196 1134 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 KIF5AQ12840 1032 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 MSANTD2Q6P1R3 559 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 BEND5Q7L4P6 421 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 RHOT2Q8IXI1 618 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 NECTIN4Q96NY8 510 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 CDK5RAP1Q96SZ6 601 aaKnown RBP16.4■□□□□ 0.22
DDX55-203ENST00000421670 TBCBQ99426 244 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 DDX23Q9BUQ8 820 aaKnown RBP16.4■□□□□ 0.22
DDX55-203ENST00000421670 SMOC2Q9H3U7 446 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 TASP1Q9H6P5 420 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 SMPD4Q9NXE4 827 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 COX16Q9P0S2 106 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 CALCOCO1Q9P1Z2 691 aa16.4■□□□□ 0.22
DDX55-203ENST00000421670 KIF26AQ9ULI4 1882 aaPredicted RBP16.39■□□□□ 0.21
DDX55-203ENST00000421670 TRAV19A0A0A6YYK7 116 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 CCP110O43303 1012 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 BUB1O43683 1085 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 OLFM2O95897 454 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 MBL2P11226 248 aaPredicted RBP16.39■□□□□ 0.21
DDX55-203ENST00000421670 HDCP19113 662 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 DDX6P26196 483 aaKnown RBP eCLIP16.39■□□□□ 0.21
DDX55-203ENST00000421670 SDC4P31431 198 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 ATP5C1P36542 298 aaKnown RBP16.39■□□□□ 0.21
DDX55-203ENST00000421670 SLC25A52Q3SY17 297 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 CCDC14Q49A88 953 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 RAB6CQ53S08 254 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 SH3PXD2AQ5TCZ1 1133 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 DAB2IPQ5VWQ8 1189 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 TADA2BQ86TJ2 420 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 CMTM8Q8IZV2 173 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 TXLNBQ8N3L3 684 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.39■□□□□ 0.21
DDX55-203ENST00000421670 MYADMQ96S97 322 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 NPY6RQ99463 290 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 RAB6CQ9H0N0 254 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 FAM204AQ9H8W3 233 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 LZTFL1Q9NQ48 299 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 OLA1Q9NTK5 396 aaKnown RBP16.39■□□□□ 0.21
DDX55-203ENST00000421670 MARCH2Q9P0N8 246 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms