RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SLC2A13Q96QE2 648 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 SLC22A12Q96S37 553 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 MYADMQ96S97 322 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 CYP2S1Q96SQ9 504 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 RNF38Q9H0F5 515 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 MYO1AQ9UBC5 1043 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 TMEM59LQ9UK28 342 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 NAALADL1Q9UQQ1 740 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 SIGLEC16A6NMB1 481 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 GJB6O95452 261 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 LAMP2P13473 410 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 KCNQ1P51787 676 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 GPC5P78333 572 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 MAMLD1Q13495 774 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 SYPL2Q5VXT5 272 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 DCUN1D2Q6PH85 259 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 POTEHQ6S545 545 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 DEFB106AQ8N104 65 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 TDRD5Q8NAT2 981 aaKnown RBP18.34■□□□□ 0.53
LINC00271-201ENST00000421378 MCEEQ96PE7 176 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 MRPL47Q9HD33 250 aaKnown RBP18.34■□□□□ 0.53
LINC00271-201ENST00000421378 DNMT3LQ9UJW3 386 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 NR2E1Q9Y466 385 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 DOCK8Q8NF50 2099 aa18.33■□□□□ 0.53
LINC00271-201ENST00000421378 TMEM253P0C7T8 217 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 MBL2P11226 248 aaPredicted RBP18.33■□□□□ 0.52
LINC00271-201ENST00000421378 FLT3P36888 993 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 MATKP42679 507 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 MAGEA1P43355 309 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 EFEMP1Q12805 493 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 PPP1R15BQ5SWA1 713 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 EMC1Q8N766 993 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 ATXN2LQ8WWM7 1075 aaKnown RBP18.33■□□□□ 0.52
LINC00271-201ENST00000421378 ASB16Q96NS5 453 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.52
LINC00271-201ENST00000421378 MARCH2Q9P0N8 246 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 INTUQ9ULD6 942 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 STAP1Q9ULZ2 295 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 PCDHA13Q9Y5I0 950 aa18.33■□□□□ 0.52
LINC00271-201ENST00000421378 NUP210Q8TEM1 1887 aaPredicted RBP18.32■□□□□ 0.52
LINC00271-201ENST00000421378 MDM4O15151 490 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 CYP1A2P05177 515 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 NOS2P35228 1153 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 RFC1P35251 1148 aaPredicted RBP18.32■□□□□ 0.52
LINC00271-201ENST00000421378 RPL7AP62424 266 aaKnown RBP18.32■□□□□ 0.52
LINC00271-201ENST00000421378 KRT83P78385 493 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 SLC7A9P82251 487 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 FAM78AQ5JUQ0 283 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 MSANTD2Q6P1R3 559 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 MIB1Q86YT6 1006 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 ARID3BQ8IVW6 561 aaPredicted RBP18.32■□□□□ 0.52
LINC00271-201ENST00000421378 ACRBPQ8NEB7 543 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 JOSD2Q8TAC2 188 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 DQX1Q8TE96 717 aaKnown RBP18.32■□□□□ 0.52
LINC00271-201ENST00000421378 SMARCD2Q92925 531 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 ARHGEF26Q96DR7 871 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 RPGRIP1Q96KN7 1286 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 DESI2Q9BSY9 194 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 SMG9Q9H0W8 520 aaKnown RBP18.32■□□□□ 0.52
LINC00271-201ENST00000421378 SMOC2Q9H3U7 446 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 EPS15L1Q9UBC2 864 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 RASAL2Q9UJF2 1139 aa18.32■□□□□ 0.52
LINC00271-201ENST00000421378 C2CD4BA6NLJ0 364 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 PRAMEF12O95522 483 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 WEE1P30291 646 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 TRNP1Q6NT89 227 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 NUP85Q9BW27 656 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 TDP1Q9NUW8 608 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 SMPD4Q9NXE4 827 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 RRN3Q9NYV6 651 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 SFMBT1Q9UHJ3 866 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 ARHGAP26Q9UNA1 814 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 REXO2Q9Y3B8 237 aaKnown RBP18.31■□□□□ 0.52
LINC00271-201ENST00000421378 CPQQ9Y646 472 aa18.31■□□□□ 0.52
LINC00271-201ENST00000421378 C2CD4DB7Z1M9 353 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 PDGFRAP16234 1089 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 SDC4P31431 198 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 SLC25A52Q3SY17 297 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 ADAM32Q8TC27 787 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 USP13Q92995 863 aaPredicted RBP18.3■□□□□ 0.52
LINC00271-201ENST00000421378 CFAP57Q96MR6 1250 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 SERPINB11Q96P15 392 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 DDX23Q9BUQ8 820 aaKnown RBP18.3■□□□□ 0.52
LINC00271-201ENST00000421378 CTTNBP2NLQ9P2B4 639 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 CCL26Q9Y258 94 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 HELZP42694 1942 aaKnown RBP18.3■□□□□ 0.52
LINC00271-201ENST00000421378 MSI1O43347 362 aaKnown RBP18.3■□□□□ 0.52
LINC00271-201ENST00000421378 TRUB2O95900 331 aaKnown RBP18.3■□□□□ 0.52
LINC00271-201ENST00000421378 GPD1P21695 349 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 SULT1E1P49888 294 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 VAV2P52735 878 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 KIAA1328Q86T90 577 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 TAC4Q86UU9 113 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 PLCD3Q8N3E9 789 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 RXFP2Q8WXD0 754 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 RFFLQ8WZ73 363 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 NT5C3BQ969T7 300 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 ZFRQ96KR1 1074 aaKnown RBP18.3■□□□□ 0.52
LINC00271-201ENST00000421378 NPY6RQ99463 290 aa18.3■□□□□ 0.52
LINC00271-201ENST00000421378 KCNF1Q9H3M0 494 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms